Artibeus jamaicensis (Jamaican fruit-eating bat): 119044911
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Entry
119044911 CDS
T07223
Symbol
COL27A1
Name
(RefSeq) collagen alpha-1(XXVII) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm04820
Cytoskeleton in muscle cells
ajm04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119044911 (COL27A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119044911 (COL27A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ajm00536
]
119044911 (COL27A1)
Glycosaminoglycan binding proteins [BR:
ajm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119044911 (COL27A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119044911
NCBI-ProteinID:
XP_036995372
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MGAGSARGPRGTAAVAARGGGFLFTWILVSFACHLASTQGAPEDVDVLQRLGLSWTKAAG
GRNPPPPGVIPFQSGFIVTQRARLQAPTTTIIPASLGTELALVLSLCSHRVNHAFLFAVR
SRKHKLQLGLQFLPGKTVIHLGPRRSVAFDLDVHDGRWHHLALELRGRTVTLATACGQRR
VPVPLGFHRDPVLDPEGSFLFGKMSPHAVQFEGALCQFSIYPVTQVAHNYCTHLRKQCGQ
ADMYRPQLGPLLPRDPGAPLAFQTDLALLGLENLTTAMPAPGSRPAGRVTMVLATPAKPL
RTSNTNPHKPVSVRERAWTPLPPAKLSASEALPPVPPASPASSTMPVQPLQKSTATKIPK
SHPIKPSAPSPSIPSIKSPRPTQKAAPPSFTKSAPPTKKPVPPTLRPAPAKVSHPSVKPI
QRNSATPRRPPPSARPLSPVTGASQKPFPPVVRTEARMSSRAGEPAPARTSTHRPPQPTV
STPSPASGPGSTRTTQPLATAMPPTLTPGSIPSGSKTPTGSEDTKKARPKSSPRKPFPLR
AGKAARDDPVRDLTTRPSPRQPRPGQQSTPAPVLVPARFLSSSPWPTSSGYSLLHLVGPT
PFPLLMGPPGPKGDCGLPGPPGLPGLPGPPGARGPRGPPGPHGNPGLPGPPGAKGQKGDP
GLSPGKAHDGTKGDMGLPGLLGNPGPLGRKGFKGYPGPAGHPGEQGQPGPEGSPGAKGYP
GRQGLPGPIGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGER
GPPGLDGNPGELGLPGPPGVPGLIGDMGALGPVGYPGPKGMKGLMGNVGEPGLKGDKGEQ
GVPGVSGDPGFQGDKGSQGSPGLPGARGKPGPMGKVGDKGSLGFPGPPGPEGFPGDIGPP
GDNGPEGVKGKPGARGLPGPPGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGLK
GEPGNSGRPGPVGEQGLLGFIGLVGEPGTVGEKGDRGMTGPPGAPGPKGSMGHPGMPGGV
GTPGEPGPPGPPGSRGPPGMRGTKGRQGPRGPDGPAGEQGPRGLKGPPGPQGRPGQPGQQ
GAPGERGHLGTRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEP
GLPGEAGMKGDLGPLGPPGEQGLIGQRGEPGLEGDGGPSGPDGLKGDRGDPGPDGERGEK
GQEGLTGEDGPPGPPGVTGVRGPEGKPGKHGEKGRTGAKGAKGYQGQLGEMGAPGDPGPP
GTPGPKGSRGSLGPTGAPGRMGPQGEPGLAGYDGHKGVVGPLGPPGPKGEKGEQGEDGKA
EGPPGPPGDPGPVGDRGDRGEPGDPGYPGQEGVQGLCGNPGQQGLPGHPGPRGRPGPKGS
KGEEGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQGPEGVAGPDGLPGRDGQPGQQGE
QGDDGAPGPMGPAGKRGNPGVAGLPGAQGPPGFKGEGGLPGQVGPPGKRGTEGGTGLPGS
QGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPLGT
LGPSGRPGPKGDKGSQGNLGLQGPRGPPGPRGRPGPPGPPGSPTHFQQDDLGAAFQTWVD
TNGALRAEVYSHPDRLVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDLMDCEQ
KMADGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAISRVQMNFLHLLSSE
VTQHITIHCLNMAVWQEGAGQTPAKQAVRFRAWNGQIFEAGGQFRPEVSMDGCKVQDGRW
HHTLFTFRTQDPQQLPIVGVDNLPPASSGKQYRLEVGPACFL
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgggatccgcgcgggggccccgaggcacagcagcggtggcggctcgcgggggg
gggtttctcttcacctggatcttagtctcatttgcctgtcatctggcctccacccaagga
gctcctgaagatgtggatgtccttcagcggctgggcctcagctggaccaaggcagcgggt
ggccggaaccccccaccgccaggggtcatcccgttccagtcaggcttcatcgttacgcag
cgggcccggctgcaggcccccacgaccaccatcatcccagcctccttgggcacagagctg
gcgctggtgctgagcctctgctcccatcgggtgaaccatgccttcctcttcgctgtccgt
agccggaagcacaagctgcagctgggcctgcagttcctccccggcaagacggtcatccac
ctggggccccggcgctctgtggccttcgacctggacgtgcatgatgggcgctggcaccat
ctagccctggagcttcgtggccgcacagtcaccctggcgacggcctgtgggcagcgccga
gtgccggtcccgctgggtttccacagggacccggtgctcgacccggagggctccttcctt
tttggaaagatgagcccacatgcggtccagtttgaaggtgctctgtgccagttcagtatc
taccctgtgacgcaggtcgctcacaattactgtacccacctgagaaagcagtgtggacag
gctgacatgtaccggccccagctggggccccttctcccccgagaccctggtgcacccctt
gccttccagaccgaccttgccctgctaggcctggagaacctgaccactgccatgccagcc
ccgggttcacggccagcgggcagggtgactatggtgctcgccacacccgccaagccccta
aggactagcaacacaaaccctcacaagcctgtctcagtgcgagaacgagcctggacccca
ctgccacctgccaagctatcagcaagtgaagcacttcctcccgtgcccccggcctctcct
gccagctccaccatgcctgtccagccattgcaaaagagcacagccaccaaaatccccaaa
agccacccaatcaagccttcagccccttctccttcaattccctctatcaaaagccctcgc
cccacccagaaagcagctccaccttcctttacaaaatcagctcctcccaccaagaagcca
gtgccaccaaccttacgcccggctcctgccaaagtgtcccatccctcggtgaagccgatc
cagaggaactctgccacgcccagacgcccaccacccagtgcccggcccctgtcccccgtc
actggtgcctcccaaaagccctttcccccagtggtccggacagaggccagaatgagcagc
cgtgctggtgagccggctcctgcccgcaccagcacacacagacctccccaacccaccgtt
tcgactccgtcgcctgcctccggtcctggctctaccaggaccactcagccactagccaca
gcgatgcctcctaccctcactcctggttcaatcccctctggaagcaagacacccactgga
tcagaagacacaaagaaagccagacccaagagcagcccccggaagcccttccccctccga
gccgggaaggcggccagggatgaccctgtccgtgatctgacaactcggcccagccctagg
cagccccggcccggccagcagagcaccccggccccggtgttggtcccagcgcgattcctg
tcctccagcccctggcccacgagcagtggctattcgctcctccacctggtgggacccacg
cctttcccgctgctgatgggacctccaggacccaagggagactgtggtttgccgggtccc
cctgggctgcctgggctccctggaccccccggtgcacgggggcctcggggtcctcctggg
cctcatggaaatccaggcctacctggccctcctggagccaaaggacagaaaggggacccg
gggctctcaccaggaaaggcccatgatgggacaaagggtgacatgggcttgcctgggctc
cttgggaatccgggacctcttggacgaaagggattcaagggctatcctggaccagcgggg
caccctggagaacaggggcagccgggaccagagggcagcccaggggccaaaggttaccct
ggcaggcaggggttacctggtcctataggagaccctggccccaaaggcagcaggggctac
atcgggcttccagggctcttcggcctgccagggtctgatggagagcgaggcctgcctggc
gttcctggcaagaggggcaagatgggtaggccgggctttcctggagactttggggaaaga
ggccccccaggactggatggaaaccccggagaactgggcctgccagggcccccaggagtc
cccggcctcattggcgacatgggagcactgggtccggtcggctacccgggacctaagggc
atgaagggactgatgggaaacgtgggggagcccggactgaaaggtgataagggtgaacaa
ggggttccaggtgtgtcaggagaccccggattccaaggagacaaggggagccagggatcg
ccggggctcccaggcgcacgggggaagccagggcctatgggcaaagttggagacaaaggg
tcccttgggtttcctgggccccctgggcccgagggattccctggagacatcggcccccct
ggggacaacggcccagaaggtgtgaagggtaagcccggagctcgaggcctgccgggaccc
ccggggcagctggggcccgagggtgatgagggacccatggggccacctggggctcctggc
ttggagggtcagcctggcaggaaagggtttcctgggaggcctggccccgatggcttgaag
ggggagccaggcaactctggacggccgggacctgttggtgagcagggacttctgggattc
attggtctggttggggagccaggaaccgtgggagaaaagggtgaccgtggcatgacggga
cccccaggagcacctggacccaaggggtcaatgggtcatcctggaatgccaggtggagtt
gggacccctggagagcctggacccccgggtcctccaggatctcgaggtccaccaggcatg
aggggaacaaagggacgccagggcccccgaggaccagacggaccagctggggagcagggg
ccccggggtctgaagggcccgccaggaccgcagggccgaccgggccagcctgggcagcag
ggcgcacctggtgagcgagggcacttgggcacccgaggctttcctggcatcccgggtccc
tcgggcccgccaggcaccaagggcctcccaggagaaccgggccctcagggaccccaggga
cccattgggcctccaggagagatgggacccaagggcccacctggtgcagtgggagaacca
ggacttcctggggaagccgggatgaagggtgaccttgggcctcttggcccccccggggag
cagggcctcattgggcagcggggagagccaggcctcgagggtgacggtggcccttcaggg
cccgacgggctgaagggggacaggggtgacccagggcctgatggtgagcgtggcgagaag
ggccaggagggactgacgggtgaggatgggccccccggcccccctggtgtcaccggcgtc
cggggtcctgaaggaaagccagggaaacacggcgagaagggccggactggagccaagggt
gccaagggctaccaaggacagctgggcgagatgggagcccctggagaccccggaccccct
ggcaccccaggccctaaagggtcccggggcagcctgggaccaacgggtgctcccggacgg
atggggccccaaggagaaccaggactggccggctacgatggacacaaaggcgtcgtggga
cccctggggcctcccggaccaaagggcgaaaagggtgagcagggtgaggatggcaaggct
gagggccccccaggaccacccggagacccgggccccgttggggatcgaggagaccgtggg
gaaccaggggaccccggataccctggacaggagggcgtacaaggcctctgtggaaacccg
ggccagcagggcctgcctgggcatccgggaccccgggggcggccgggccccaaaggatca
aaaggggaagagggaccaaagggaaagcaaggcaaggctggggcccctggacggaggggg
atccagggtctgcagggcctgccagggccccggggcgtggtggggagacagggccccgaa
ggtgttgctggaccagatgggcttcctggcagggacggtcaaccagggcagcagggggaa
caaggagatgatggggcccctggccccatgggccctgctgggaagagaggaaatccaggt
gtggctggcttgcccggagcacagggacccccaggattcaagggtgaaggtggattaccc
gggcaggtgggtccgcccgggaagcgagggacagagggcggaacagggcttcctgggagc
cagggggagcctggatccaaaggccagccgggtgactctggcgagatgggcttcccagga
atggctggcctctttggacccaaggggccccctggagacattggcttcaaaggcatccag
ggccctcgggggcctcctggcttgatgggaaaagaaggcatcattgggccccttgggacc
ttgggaccttcaggacgcccgggtccaaagggcgacaaaggcagccaagggaacttggga
ttgcaaggtccgaggggtcctcccggccccagagggcgacctggcccaccgggccctcca
gggagccccacccactttcaacaagatgaccttggggcagctttccagacgtgggtggac
actaatggagcactgagagcagaggtttacagccacccagaccggctggtgctggaccag
ggaggggagatatttaaaaccttacactacctcagcaacctcatccagagcatcaagact
cccctgggcaccaaagagaaccccgcccgggtctgccgggacctcatggactgtgagcag
aagatggcagacgggacctactgggtggacccgaaccttggctgctcgtccgacaccatc
gaagtctcctgcaacttcactcatggtggacagacatgtctcaagcccatcacagcctcc
aaggtggagtttgccatcagccgggtacagatgaactttctgcacctgctgagttctgag
gtgacgcagcatatcaccatccactgccttaacatggccgtgtggcaggaaggcgccggg
cagaccccagccaagcaggctgttcgcttccgggcctggaacgggcagatctttgaagct
gggggtcagttcaggccggaagtgtccatggatggctgcaaggtccaggatggccgctgg
catcacacgctctttaccttccggacccaggatccccagcagctgcccattgtcggcgtg
gacaacctccctccggcctcttcagggaaacagtatcgcctggaagttggacctgcgtgc
ttcctctga
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integrated database retrieval system
