Artibeus jamaicensis (Jamaican fruit-eating bat): 119046277
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Entry
119046277 CDS
T07223
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119046277 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajm03019
]
119046277 (PARN)
Enzymes [BR:
ajm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
119046277 (PARN)
Messenger RNA biogenesis [BR:
ajm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119046277 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
T6PP_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
119046277
NCBI-ProteinID:
XP_036997126
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFLAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYINSKYIIKSFNFYVFPKPFSRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQNEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
CCPLPEDLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMTNYLGSFLSPPKIHVSARSKLIEPFIN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKHEEKQIKRKWPEDSWKEVERKRLN
NQCISCALQNHYYRTNSLTGTSSGRKRSLSPSQADTGSEARVSEEISDLELEQTDSCAES
PLERRKKTKKFKRMKKDHSPAGSASDGSAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcataaagtgtaccaggccatagag
gaagcggacttccttgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
actgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacataaat
tcaaagtatataataaagtcatttaacttctatgttttcccgaaacccttcagtagatcc
tccccagatgtcaaatttgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgactttaataaggtttttcgcaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgtttacagtccaacggtgcaggagctctatcg
tatgtgtctcctaacacatcaaaatgtcctgtgacgattcctgaggatcagaaaaaattt
attgaccaagtggtagagaaaatagaagatttattacaaaatgaagaaaataagaacttg
gatttagagccatgtacagggttccaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcacgttgagactttagaaactgaaaagaaggagcgatacatagtt
attagtaaagtagatgaagaagaacgtaaaagaagagagcagcagaaacatgctaaagaa
caggaagaactgaatgatgctgtggggttttctagggtcattcatgccattgctaattcg
ggaaagcttgttattggacacaatatgctcttggatgttatgcacacagttcatcagttc
tgctgccctctccccgaggacttaaatgaatttaaggagatgacaacatgtgtttttccc
agactcttggatactaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcagaactggaaaagcgattaaaagagacacctttcaaccctcctaaagtt
gaaagtgcagaaggttttccaagttatgatacggcttctgaacagctgcatgaggcaggc
tatgatgcttatatcacgggattgtgtttcatctccatgacaaactacctaggttcattt
cttagtcctccaaaaattcatgtgtctgccagatcaaaactcattgaaccttttattaac
aagttatttcttatgagagtcatggatattccctatctaaacttggaaggaccagacttg
cagcctaaacgtgatcacgttctccatgtaacattccccaaagagtggaaaaccagtgac
ctttaccagcttttcagtgcctttggtaacattcagatatcttggattgatgatacatca
gcatttgtttctcttagccagcctgagcaagtacaaattgctgtcaataccagcaaatat
gcagaaagctatcggattcagacgtatgctgaatatgtggggaaaaaacatgaggagaaa
cagatcaagagaaagtggccagaagatagctggaaggaggttgagagaaagcggttaaac
aatcagtgcatatcctgtgctctgcagaatcactattaccgcaccaatagtcttacaggc
accagctcagggagaaagagaagtctgagtcccagtcaagcagacactggctcagaggcc
agagtatcggaagagatatctgaccttgaacttgagcagacagattcctgtgcagaatct
cccttggaaagaaggaaaaagactaagaaatttaaaagaatgaagaaggaccattctcca
gcaggaagcgcctcggacggctctgccaagctcttcgaagttcctgacacgtggtaa
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