Artibeus jamaicensis (Jamaican fruit-eating bat): 119049446
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Entry
119049446 CDS
T07223
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm00100
Steroid biosynthesis
ajm01100
Metabolic pathways
Module
ajm_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
119049446 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ajm01006
]
119049446 (FDFT1)
Enzymes [BR:
ajm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
119049446 (FDFT1)
Prenyltransferases [BR:
ajm01006
]
Terpene biosynthesis
Squalene/phytoene synthase
119049446 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
119049446
NCBI-ProteinID:
XP_037001328
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MKSQEVKASFLQVEPATLTVPLGSREKGLQARGQGAGPSPVAPRTTIGSGRALAPGLPVW
SLLECKESSPRLLGGRLPAPLGSMEEKLGAGASFLMAAVACGTKAMSLFKRTLVLSPTAA
PRGTGSPPRCWPSKEWPRGEGICVRLLSPTAACRLPQSHSHSCSSTSATSVCLLCPQDSL
SSSLKTCYKYLHQTSRSFAAVIQALDEEMRHAVCIFYLVLRALDTVEDDMTISIEKKIPL
LHNFHSYLYEPDWRFMESKEKYRQVLEDFPTISLEFRNLAVKYQTVIADICQKMGAGMAE
FLNKRMTSEQDWEKYCHYVAGLAGIGLSRLFAASELEDPLIGEETECSNAMGVFLQKTNI
IRDYLEDQQEGREFWPQEVWSKYVKKLSDFAKPENIDLAVQCLNELITSALHHIPDVITY
LSKLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGLVKIRKGQAVTLMMNATNMPAVKA
ILYQYMEEIYHKIPDSDASSSKTRQIISRIRTQNLPSCQLVSRSHYSPIYLSFVMLLAAL
SWQYVSTLSQVTEDCVQTGEH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctcaggaggtaaaagcaagcttcttgcaagtggagccagcaacgttaactgta
cctttggggtctagggagaaagggttgcaagccagaggccaaggggcgggtccatctcct
gttgctcctcggaccacaattggcagtgggcgggctctcgctcctggcctgccagtctgg
agtcttttggagtgcaaggagagctcgccccgcctcctcggtgggcgtcttccagcgcct
cttgggtctatggaggaaaaacttggcgctggagcctcgtttctcatggctgcagtcgcc
tgcggcaccaaggccatgtccctctttaagcggaccttggtgctgagccccaccgcggca
cccaggggcacaggtagccccccgcgctgctggccctccaaagagtggccacggggagag
ggcatctgcgttcggctattgagccctacggctgcctgccgcctgccccagtctcactcc
cactcctgctcctcgacgtctgctacctctgtgtgtctcctctgcccgcaggactcgctc
agcagctccttgaaaacttgctacaagtatctgcatcagactagtcgcagtttcgcagct
gttatccaggcgttggatgaagaaatgcgccatgcagtgtgcatcttttacctggttctc
cgggctttggacacggtggaggatgacatgaccatcagtatagaaaaaaagatcccactg
ttacacaactttcactcttacctttacgaacctgactggcggttcatggagagcaaggag
aagtatcgacaagtgctagaggacttccccacgatctcccttgagtttcgaaatctggct
gtgaaatatcaaacagtgattgccgacatttgccagaaaatgggagctgggatggcagag
tttttgaataagcgcatgacatcggaacaggactgggagaagtactgtcactatgtggct
gggctggcgggaatcggcctttctcgcctgtttgcggcctcagagctggaagaccctctg
attggagaagagacggagtgctccaatgctatgggtgtgtttctgcagaaaacaaacatc
atccgcgattacctggaggatcagcaagaaggaagagagttttggcctcaagaggtttgg
agcaagtatgttaagaagttgagtgattttgctaagccagagaacatcgacttggccgtg
cagtgtctgaatgaacttataacgagtgcgctacaccacattccagatgtcatcacctac
ctttccaaacttagaaaccaaagtgtgtttaacttttgcgctattccccaggtaatggcc
attgctactctggctgcctgttacaataatcagcaggtgttcaaagggttagtgaagatt
cggaaaggacaagcagtgactttaatgatgaacgccaccaacatgccagctgtcaaagct
atattataccagtatatggaagagatctatcataaaatccccgactcagacgcatcctct
agtaaaaccaggcagatcatctccaggatcaggacacagaatcttcccagctgtcagctg
gtctcccgaagccactactcccccatttacctgtcatttgtcatgctcctggctgccctg
agctggcagtatgtgagcaccctgtcccaggtcacagaagactgtgtccagaccggagaa
cactga
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