Artibeus jamaicensis (Jamaican fruit-eating bat): 119051021
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Entry
119051021 CDS
T07223
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119051021 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ajm01009
]
119051021 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ajm04515
]
119051021 (PCDH1)
Protein phosphatases and associated proteins [BR:
ajm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119051021 (PCDH1)
Cell adhesion molecules [BR:
ajm04515
]
Cadherins
Protocadherins
119051021 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
119051021
NCBI-ProteinID:
XP_037003477
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MDCKARGRRCPEAGKDPAAVEAAVAPGALLILEPARMGPLRPSPGPGGRQLLLPPLLLAL
LLLLAASPGHGTQVVYKVPEEQPPNTLIGSLTADYGFPDVGHLYKLEIGAPYLRVEGRTG
DIFTTETSIDREGLRECQNQLPGEPCILEFEVSVTDLSQNGSPRLLEGQIEVQDINDNTP
NFASPVITLPIPENTNIGSLFSIPVASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQD
GKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVAVLDTNDNAPKFEQPSYE
AELSENSPIGHSVIQVRANDSDQGANAEIDYMFHQAPEVVRRLLRLDRNTGLITVQGPVD
REDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISE
DVAAETAVALVQVSDRDEGENAAVTCVVANNVPFKLRQASETGSDSKKKYFLQTTSPLDY
EMDRDYNIMIVAVDAGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNMPDEVVA
EVTASDADSGSNAELVYSLEPESAAEGLFTISPETGEIRVKTSLDREQRENYELKVVAAD
RGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAR
VQLTVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVL
DENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSITGGNPYGLFQ
IGSRSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLENLL
GHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGIVAVALLIALAVLVRYCRQREAKSGY
QAGKKETKDLYTPKPSSKASKGNKGKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAP
GDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGT
GDTTSTGSEQYSDYSYRTNPPKYPNKQLPHRRVTFSTTSQAQELQDPSQHSYYDSGLEES
ETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSE
FGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNPKTAPVR
LLPPYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPTATTASAQTAKREIYL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggactgcaaggcccgcggccggcgctgccccgaggcgggtaaggatccggcggcggtg
gaggcggcggtggctcccggcgccctcctgattctggagcctgccaggatggggcccctg
aggcccagcccaggccctggggggcgacagttgctgctgccccccttgctgctggcactg
ctactcctgctggcagcatccccgggccacggcactcaagtggtgtacaaggtgccagaa
gagcagccacccaacaccctcattgggagcctcacagccgactatggttttccagatgtg
ggccacctttacaaactagagataggtgccccgtacctgcgagtggagggcaggacaggc
gacatcttcaccactgagacctctatcgaccgagaggggctccgtgaatgccaaaaccag
ctccccggtgagccctgcatcctggagttcgaggtgtctgtcacagacctctcgcagaat
ggcagtccccggctgcttgagggccagatagaggtgcaggacatcaacgacaacacaccc
aacttcgcctccccggtcatcacactgcccatcccggagaacaccaacatcggctcactc
ttctccatcccagtggcttcagaccgtgatgctggtcccaacggtgtggcatcctatgag
ctgcaggctggacctgaggcccaggagctgtttgggctgcaggtggcagaggatcaggac
gggaaacagccacagctcatcgtgatgggcaacctggaccgggaacgctgggactcctat
gacctcaccatcaaggtgcaggatggcggcaaccccccacgcgccagcagtgccctgctg
cgggtcgctgtgctagacaccaatgacaacgcccccaaatttgagcaaccttcctatgag
gctgagctgtctgagaacagcccaataggccactccgtcatccaggtgagggccaatgac
tcggaccaaggtgccaacgcggagatcgactacatgttccaccaggcacccgaagtggtg
aggcgtcttctgcgcttggataggaacactggactgatcaccgtgcagggccccgtggac
cgtgaggacctgagcaccctgcgcttctcagtgcttgccaaggaccggggcaccaacccc
aagagtgcccgtgcccaggtggtggtgaccgtgaaggacatgaatgacaatgcccccacc
attgagatccggggcatagggctggtgacccatcaagatgggatggccaacatctcagag
gatgtggcagcggagacagctgtggccctggtgcaggtatctgaccgagacgagggagag
aatgcagccgtcacctgtgtggtggcaaataatgtgcccttcaagctacgccaggccagt
gaaacgggaagtgacagcaagaagaagtacttcctgcagaccaccagccccctggactat
gagatggacagagattacaacatcatgatcgtggccgtggatgccggcaaccctccactc
tccagcaccaactccctcaaggtacaagtggtggatgtcaatgacaacgcacctgtcttc
acccagagcgtcactgaggtcgcctttccagaaaacaacatgccagatgaagtggtggct
gaggtcactgccagtgacgctgactcgggctccaacgctgagctggtctactctctggag
ccggagtcggccgccgagggcctcttcaccatttcacctgagaccggagagatccgggtg
aagacatcccttgatcgggaacagcgggaaaactacgagttgaaggtggtggcagctgac
cggggcagccccagcctccagggcacagccactgtcctcgtcaatgtgctggactgcaat
gacaatgaccccaagtttatgctgagcggctacaacttctcagtgatggagaacatgcca
gcattgagtccagtgggcatggtgaccgtcattgacggggacaaaggggagaatgcccgg
gtacagctcacagtggagcaggacaacggcgacttcgtcatccagaacggcacaggcacc
atcctctctagcctgagctttgatcgagagcagcaaagcacctacaccttccagctgaag
gcggtggacggtggcgtcccacctcgctctgcttacgttggtgtcactatcaacgtgctg
gacgagaatgacaatgcaccctttattactgccccttccaacacctcccaccggctgctg
accccccagacacgtcttggggagacagtcagccaggtaacagctgaggacattgactcc
ggtgtcaatgctgagctgacctacagcattaccggcggcaacccttacggactcttccag
attggatcacgttcaggtgccatcaccctggagaaggagattgagcggcgccaccatggg
ctgcaccgtctagtggtgaaggtcagtgaccgcggcaagcccccacgctatggcacagcc
ttggtccacctttatgtcaatgagaccctggccaaccgcacgctgctggagaacctgttg
ggccacagcctggatacgccgctggacatcgacattgccggggatccagaatatgagcgc
tccaagcagcgtggcaacatcctctttggggtggtggctggcatcgtggccgtggctttg
cttatcgccctggccgtgctcgtgcgctactgccgtcagcgggaggccaagagtggctac
caggctgggaagaaggagaccaaggacctgtacacccctaagcccagcagtaaagcctcc
aagggaaacaaaggcaaaggcaagaagagcaagtccccgaagcctgtgaaaccagtggag
gatgaagacgaggctgggctacagaagtccctcaagttcaacctgatgagcgatgcccct
ggggacagcccccgcatccacctgcccctcaactacccaccaggcagccctgacctgggc
cgccactaccgctccaactccccactgccttccatccagctgcagccccagtcaccctca
gcctccaagaagcaccaggtggtgcaggacctgccgcctgcaaacacatttgtgggcact
ggggacaccacgtccacgggctctgagcagtactccgactacagctaccgcaccaatccc
cccaaataccccaacaagcagttacctcaccgccgcgtcaccttctccaccaccagccag
gcccaggagctgcaggacccgtcccagcacagttactacgacagtggtctggaggagtct
gagacgccgtccagcaagtcctcctcggggccccggctcggtcccctggctctgcctgag
gaccactatgagcgcaccacccccgatggcagcataggggagatggagcaccctgagaac
gacctgcgccctttgcctgatgtcgcaatgacgggcacatgtacccgggagtgcagcgag
tttggtcactctgacacgtgctggatgcctggccagtcgtctcccagccgccggaccaag
agcagcgccctcaaactctccaccttcgtgccttaccaggaccgaggagggcaggagccc
gcgggcgctggcagccccagcccgccggaagaccggaaccccaaaacggcccccgtgcgc
ctcctgcccccctacagtgccttctcccacagtagccatgactcctgcaaggactcggcc
accttggaggagatccccctgacccagacctcggacttcccgcccacagccacaacggca
tctgcccagacggccaagcgtgagatctacctgtga
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