Artibeus jamaicensis (Jamaican fruit-eating bat): 119052647
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Entry
119052647 CDS
T07223
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm04151
PI3K-Akt signaling pathway
ajm04510
Focal adhesion
ajm04512
ECM-receptor interaction
ajm04611
Platelet activation
ajm04820
Cytoskeleton in muscle cells
ajm04926
Relaxin signaling pathway
ajm04933
AGE-RAGE signaling pathway in diabetic complications
ajm04974
Protein digestion and absorption
ajm05146
Amoebiasis
ajm05165
Human papillomavirus infection
ajm05205
Proteoglycans in cancer
ajm05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119052647 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119052647 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119052647 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119052647 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
119052647 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
119052647 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
119052647 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
119052647 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119052647 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
119052647 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
119052647 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
119052647 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ajm00536
]
119052647 (COL1A1)
Glycosaminoglycan binding proteins [BR:
ajm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119052647 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
119052647
NCBI-ProteinID:
XP_053513145
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MFSFVDLRLLLLLAATALQTHGQEDGQEDIPPVTCVQNGIRYHDREVWKPEVCQICVCDN
GNVLCDDVICEDTKNCPGAVAPPGECCPVCPDGEVSPTDLETAGVEGPKGDTGPRGPKGP
AGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGVSVPGPMGPSGP
RGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGP
PGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGL
PGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEGP
QGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGP
PGPKGNSGEPGAPGNKGDAGAKGEPGAPGIQGPPGPAGEEGKRGARGEPGPAGLPGPPGE
RGGPGGRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS
PGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGA
VGAAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGD
LGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGGQGAPGL
QGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGETGP
SGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGP
AGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGG
KGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQ
RGERGFPGLPGPSGEPGKQGPSGPSGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGR
DGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPSGPAGPIGPAGARGP
TGPQGPRGDKGEAGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGS
PGAPGKDGLNGLAGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQ
EKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCH
SDWKNGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKEKKHVWF
GESMTGGSQFEYGGQGSDPADVAIQLTFLRLMSTEASQNLTYHCKNSVAYMDQQTGNLKK
SLLLQGSNEIELRSEGNSRFTYTVTHDGCTSHTGTWGKTVIEYKTTKTSRLPIIDVAPLD
IGAPDQEFGIDVGPVCFL
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctccagacg
cacggccaagaggacggccaagaagacatcccaccagtcacctgcgtacagaacggcatc
aggtaccatgaccgagaagtatggaaacccgaggtctgtcagatctgtgtctgcgacaat
ggcaacgtgttgtgtgatgacgtgatctgcgaggacaccaagaactgccccggcgccgtc
gcccccccgggcgagtgctgcccggtctgccccgacggcgaggtgtcgcccacggacctg
gaaaccgccggagtcgagggacccaagggagacaccggcccccgaggcccaaagggaccc
gcaggcccccctggccgcgatggcatccctggacagcctgggcttcccgggccccccgga
ccccccggacctcccggaccccctggcctcggaggaaactttgctccccagatgtcttac
ggttacgatgagaagtcagccggagtttccgtgcctgggcccatgggtccttctggtcct
cgtggtctccctggcccccctggtgcacccggtccccaaggtttccagggccctcctggt
gagcctggcgagcccggcgcttcgggtcccatgggtccccgtggtcccgctggcccccct
ggcaagaacggagatgatggtgaagctggaaagcctggtcgccccggcgagcgtgggcct
cctggacctcagggtgcacggggattgcctggaacagctggtctccccggaatgaaggga
cacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggtcccaag
ggggagcctggtagccctggtgaaaatggagcccctggtcagatgggcccccgaggtctg
cctggtgaaagaggtcgccctggagcccctggccctgctggtgctcgtggaaatgacggt
gctactggtgctgccggcccccctggtcccactggtcccgctggccctcctggcttcccc
ggtgctgttggtgctaagggtgaagctggtccccaaggagcccgaggctctgaaggtccc
cagggtgtgcgtggtgagcccggcccccctggccctgctggtgccgctggccctgctggg
aaccctggtgctgatggacagcctggtgctaaaggtgccaacggcgctcctggtattgct
ggtgctcctggcttccctggtgcccgaggcccctctggaccccaaggccccggcggtccc
cctggtcccaagggtaacagcggtgaacctggtgctcctggcaacaagggagacgctggt
gccaagggagagcccggtgcccctggtattcaaggaccccctggccctgctggggaggaa
ggaaagcgaggagcccgaggtgaacccggacctgccggcctgcctggaccccccggcgag
cgtggtggacctggtggtcgtggtttccctggcgcagatggtgtggctggtcccaagggc
cccgctggtgaacgtggttctcctggccctgctggtcccaaaggctctcctggtgaagct
ggtcgccccggtgaagctggtctgcctggtgccaagggtctgactggaagccctggcagc
cctggtcctgatggcaaaaccggcccccctggtcccgctggtcaagatggtcgccccgga
cctccaggcccccctggcgcccgtgggcaggctggtgtgatgggattccccggacctaaa
ggcgccgctggagagcccggtaaagctggagagagaggtgttcctggcccccccggtgct
gtgggtgctgctggcaaagacggagaagctggagctcagggaccccctggccctgctggc
cctgctggtgaaagaggcgaacaaggccctgctggctcccccggattccagggtctcccc
ggccctgctggtcctcctggtgaagcaggcaaacccggtgaacagggtgttcctggagac
cttggtgcccctggcccctctggagcaagaggcgagagaggtttccccggtgagcgaggt
gtgcaaggtccccctggtcctgctggtccccgtggggccaacggtgctcctggcaatgat
ggtgctaagggtgatgctggtgcccctggagcccccggtggccagggtgcccccggcctt
cagggaatgcccggtgaacgaggtgcagcgggtcttccaggccctaagggcgacagaggc
gatgccggtcccaaaggtgctgatggtgctcctggcaaagacggtgtccgaggtctgact
ggccccatcggtccccctggccctgctggtgcccctggtgacaagggtgaaactggtcct
agtggccctgctggtcccaccggagctcgtggtgcccccggagaccgtggtgagcctggt
ccccccggccctgctggcttcgctggcccccctggtgctgatggccagcctggtgctaaa
ggcgaacctggtgatgctggtgctaaaggcgatgctggtcctcctggccctgctggaccc
gctgggccccctggtcccattggtaacgttggtgctcctggacccaaaggtgctcgtggc
agtgccggtccccctggtgctactggtttccctggtgctgctggccgagttggtcccccc
ggcccctctggaaatgctggaccccctggccctcctggccctgctggcaaagaaggtggc
aaaggaccccgtggtgagactggccccgctggacgtcccggtgaagttggtccccctggt
ccccctggccctgctggtgagaaaggagcccctggtgctgacgggcctgctggtgctccc
gggacccctggacctcagggcattgctggacagcgtggtgtggtcggcctgcccggtcag
cgaggagaaagaggcttccctggtcttcctggcccctctggtgaacctggcaaacaaggt
ccctctggaccaagtggtgaacgcggcccccctggtcccatgggcccccctggactggct
ggaccccctggcgagtctggacgtgagggagctcctggtgctgaaggttcccccggacga
gatggtgctcctggcgccaaaggtgaccgtggtgagactggccctgctggaccccctggt
gctcctggtgctcccggtgcccctggccccgtcggccctgctggcaagagtggtgaccgt
ggtgagactggtccttctggtcctgctggtcccatcggccctgctggtgcccgcggcccc
actggaccccaaggcccccgtggtgacaagggtgaggcaggcgaacagggcgacagaggc
ataaagggtcaccgcggtttctccggtctccagggtccccctggccctcccggctctcct
ggtgaacaaggtccctctggagcttctggtcctgctggtccccgtggtccccccggctct
cctggtgctcctggcaaagatggactcaacggccttgcaggccccattggcccccctggt
ccccgtggccgcactggcgacgctggtccagttggtccccccggccctcctggccctccc
ggccctcccggtcctcccagcggcggtttcgacttcagcttcctgccccagccacctcag
gagaaggctcacgatggtggccgctactaccgggccgacgatgccaacgtggtccgtgac
cgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaacatccgg
agccctgaaggcagccgcaagaacccagcccgcacctgccgcgacctcaagatgtgccac
tctgactggaagaacggagaatactggatcgaccccaaccaaggctgcaacctggacgcc
atcaaggtcttctgcaacatggagacaggtgagacctgcgtgtaccccactcagcccagc
gtggcccagaagaactggtacatcagcaagaaccccaaggagaagaagcacgtctggttc
ggcgagagcatgaccggcggatcccagttcgagtacggcggccagggctccgaccctgcg
gacgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaacctc
acctaccactgcaagaacagcgtggcctacatggaccagcagacaggcaacctcaagaag
tccctgctcctccagggctccaacgagatcgagctccggtccgagggcaacagccgcttc
acctacactgtcacccacgacggctgcacgagtcacaccggaacctggggcaagacagtg
atcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgtggcccccttggac
attggcgccccagaccaggaattcggtatcgacgtcggccccgtctgcttcctgtaa
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integrated database retrieval system
