Artibeus jamaicensis (Jamaican fruit-eating bat): 119053712
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Entry
119053712 CDS
T07223
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03013
Nucleocytoplasmic transport
ajm03015
mRNA surveillance pathway
ajm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119053712 (DDX39B)
09122 Translation
03013 Nucleocytoplasmic transport
119053712 (DDX39B)
03015 mRNA surveillance pathway
119053712 (DDX39B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajm03019
]
119053712 (DDX39B)
03041 Spliceosome [BR:
ajm03041
]
119053712 (DDX39B)
Enzymes [BR:
ajm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119053712 (DDX39B)
Messenger RNA biogenesis [BR:
ajm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119053712 (DDX39B)
Spliceosome [BR:
ajm03041
]
Complex C
Other components
EJC/TREX
119053712 (DDX39B)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119053712 (DDX39B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119053712
NCBI-ProteinID:
XP_037007263
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MRSPCSVMAENDVDNELLDYEDDEVETAAGGDGTEAPAKKDVKGSYVSIHSSGFRDFLLK
PELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQ
VSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP
GRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK
EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIF
VKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDI
ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISE
LPDEIDISSYIEQTR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgccttgctcagttatggcagagaatgatgtggacaatgagctcttggactat
gaagatgatgaggtggagacagcagctgggggagatgggactgaggctcctgccaagaag
gatgttaagggctcctatgtctccatccatagctctggctttcgggacttcctgctcaag
ccagagttgctccgggccattgttgactgtggctttgagcatccatcagaagttcagcat
gagtgcatccctcaggccattctgggaatggatgtcctatgccaggccaagtcaggcatg
ggaaagacggcagtgtttgtgctggccacactgcagcagctggagccagttactgggcag
gtatctgtgctggtgatgtgtcacactcgggagctggcttttcagatcagcaaggagtat
gagcgcttctctaaatacatgcccaatgtcaaggtcgcggtgtttttcggtggtctgtct
atcaagaaggatgaagaggtgctgaagaagaactgcccgcatatcgtcgtggggacccct
ggccgcattcttgcccttgctcgaaataagagcctcaacctcaaacatattaaacacttt
atcttggatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccaggaa
atttttcgcatgaccccccatgagaagcaggtcatgatgttcagtgctaccttgagcaaa
gagatccgtccagtctgccgcaagttcatgcaagacccaatggagatcttcgtggatgat
gagacgaagctgacgctgcatgggttgcagcagtactacgtgaaactgaaggacaacgag
aagaaccggaagctctttgaccttctggatgtccttgagttcaaccaggtggtgatcttt
gtgaagtccgtgcagcgctgcattgccctggcccagctcctggtggagcagaacttccca
gccatcgccatccaccgtgggatgccccaggaggagaggctttctcggtatcagcagttt
aaagattttcaacgacgaattcttgtggctaccaacctatttggccgaggcatggacatc
gaacgggtgaacattgcctttaactatgacatgcctgaagattctgacacctacctgcac
cgggtggcaagagcaggcaggtttggcaccaagggtttggcaatcacgtttgtgtccgat
gagaatgatgccaagatcctcaatgatgtgcaggatcgctttgaggttaacatcagtgag
ctgcctgatgagatagacatctcctcttacattgaacagacacgatag
DBGET
integrated database retrieval system
