Artibeus jamaicensis (Jamaican fruit-eating bat): 119054759
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Entry
119054759 CDS
T07223
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajm03036
]
119054759 (SHOC1)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119054759 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
119054759
NCBI-ProteinID:
XP_053512523
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MFSIFKYCAIDYLYENVVRKKSCRDTLLLRIPSCLHQHGNYHAEVIDNTFRRPWTRVSAV
SVWGMTDSSILDQWKASLDVEGFLEKKTITGMVTQINCEFEEIVPSSNPNSQTEFEEASL
HAYKDYSEVFTPIRCSGKWPEFQGEIQDLLFDHEEILFADNLTAYKNHLPTSHTLLSKLK
PFLLEDPPLDFKEQIFTEANFFRECFSFQGDLKDLIKEDFYIDKENFCRVELDDTPLFLL
DYEVIPPTFKEEVDIPSFSELKELLNLMPEIINYEDENEKLFKKDVTTNHGIDIEHRKYS
STDILAIQSQYEPESNEPELGEELEMPLSPLHLTNQHSSVNSLCTELQMFPFSPVCKIGS
GEEEGRDSEKHQCEREIPIGCLPRSPGGTEPATQAHAPTGNGTHDPSVHRTTPNQLSHTS
QDLNSLLLPACLDHKSCSSSIALIDEDSTNNNLSFPQKSPSPGKEVPDLCFSDEYISIKS
PTKEKPKDDQELVYRLIQNKKSKDCLELDCTILSTGSSSKIEKPSFKHGKKRENDLDLLN
DFIMMRNKHEICTSNTEVTDNDEKDEFQNKEDTLTPQEESPVVYTNKTLEKINCERGADN
VIEIQASESQCQAYCILEAAATPILKKLGCLCTLPVANWKFATVIFDQTRFLLKEQEKVV
SDAIHQGTNDERDMTFKQAGLLHLLVTIRDILLTCSLDTALGYLSNAKDVYKSILASYLD
DIWRQLEIVQFIKGKKPETNYKIQELQCQILNWMQSEQQIKVLIIIRMDSDGEKHLLIEI
LNKMEGLTLTVLHPNKRRDYLESEGILDGTSSCVVVHNQSIGADFPWSKFSFVVEYNHGE
NSCWTKHCEKWNIPFMAFKVILPDTVLKRSNLPDTFGGFLLDIQIPYVFFASEGLLNTPE
ILQLLESNYNITLVERCCSESLKFFGGTECYVVVTVDEHTAIILQDLEELNCEKASDNII
MRLMALSFQYSSCWVILYARKTLSSEYYLTEKTLHHLALIYAALVSFGLKSEELDVKLVI
APGVEETAVIIRQIADHNLMTSKRDPHEWLDKSWLQVSPSKEEMYLLDFPCISPLVAQLM
LNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCDITSLFKISSSSITSPRISSPEETMN
QSRTFPSQSSASGSSHSVIQEHTEYCQYPDLEETVQKDTNTASDYNSCFVGLRERERPCV
LPSVTSYRQTSYWKDSSCNPDIVQNNPFLINMESRNSAGNSFLNQNDSQTDVFSLGLTQM
NCETRISPINNQKRVASNFINSQQKGTHETKRPINKEVSAPMFSLEYSQPPAHWNYKKNV
WEQENHSFNLQCSAEQTMYDKWYSQKENLYTIQQKCLSNELGSTGKSSNAETHETFWEEL
PSVPGLDLFCSSDPNLNQKEFNSLYFHQRDGTCLGQKRHAEFSSNSGDQKSLTESTCLQR
PQSKKQRLVYEKVPGRVDGQTRLRFY
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaatattcaaatactgtgcgatagattatttatatgagaatgtagttagaaag
aagtcttgcagagatactttattgcttcgaatcccttcatgtttacatcaacatggaaat
tatcatgcagaagttattgataatacatttaggaggccatggacaagagtctcagctgtt
tcagtttggggaatgacagatagctcaatcttggatcagtggaaagcaagcctcgatgtg
gaaggcttccttgagaaaaagacaattacaggaatggtgactcagattaactgtgaattt
gaagaaattgttccaagttcaaatccaaactcccaaactgaattcgaggaagccagcttg
catgcttataaggactacagtgaagtctttacacctattagatgttcaggaaaatggcca
gaatttcaaggagaaatccaagatttgttgtttgatcatgaagaaatactttttgcagat
aatttgactgcctataaaaatcatctaccaacatcacatactttgttgagtaagctaaaa
ccgtttttgctagaagacccccctttagacttcaaagaacagatcttcacagaagctaat
tttttcagggaatgtttctcttttcaaggagatttgaaagatcttataaaagaagatttt
tacatagataaagagaacttttgtcgggtggagctagatgatacgccattatttttgctt
gactatgaagtaatacctccaactttcaaagaagaagttgatattccatcattttcagaa
ttgaaggagttattaaacttaatgccagaaataataaattatgaagatgaaaatgaaaag
ctttttaaaaaagatgttaccactaaccatggaattgacattgagcatagaaaatacagc
tccacagacattttggccattcaaagccaatatgaaccagagagcaatgaaccagagtta
ggagaagagttagaaatgccattgtctcctctacacctaacaaaccaacattcttctgtg
aattcattatgtacagaacttcagatgtttccattttctcctgtttgtaaaatagggagt
ggagaagaagaaggaagagacagcgagaaacatcaatgtgagagagaaatacccataggc
tgtcttccacgctcacccggagggactgaacctgcaacccaggcacatgccccaactggt
aatggaacccatgacccttcggttcacaggacaacgcccaaccaactgagccataccagc
caggacttgaattcacttttgcttccagcatgtctagaccataaaagttgttcctcatct
attgcacttattgatgaagattctacaaataataatttatcatttccacaaaaaagtcca
tctccaggaaaagaagtaccagacttgtgtttttctgatgaatatatctctattaaaagt
ccaacaaaagaaaaaccaaaggatgaccaagaactagtttatagactaatccaaaataaa
aaaagtaaagattgcttggaacttgattgcacaatactatccaccggatcatcttcaaaa
attgaaaaaccttcttttaaacatggtaaaaaaagggaaaatgacttggacctgttgaat
gactttattatgatgcgaaataaacatgaaatttgcacctcaaacactgaagttacagat
aatgatgaaaaagatgaatttcaaaataaagaagatactttgactcctcaagaagaaagt
cctgttgtttacactaataaaactctagagaaaataaattgtgaaaggggagcagataat
gtcattgagattcaagcatcagagagccagtgccaagcgtactgtatccttgaagcagca
gctactcctatcttaaaaaaacttgggtgcctctgtactctccctgttgctaattggaaa
tttgccactgttatttttgatcaaacaagattcctcttaaaggaacaagaaaaagtagta
agtgatgctattcatcaaggtacaaatgatgagagagacatgacgttcaagcaggcgggt
ctcttacaccttctggtcacaattcgtgatatccttttaacatgtagcttggacacagca
ttgggatatttgtcaaatgcaaaagatgtgtacaaaagcattttagcttcctatttggat
gacatttggagacagctagagattgtacaatttattaagggaaaaaagcctgaaaccaac
tacaaaatacaagaattacaatgtcagatactaaattggatgcaaagtgaacagcaaatt
aaggtgctgattataataagaatggactcagacggtgaaaaacatttactcattgaaatc
cttaacaaaatggaaggtttaacattgactgtcttacatccaaacaaaagaagagactat
ctggaatctgaaggtattttagatggtacaagttcctgtgtagtagtacataatcaatct
attggagcagatttcccctggagtaagttctcatttgtcgtggaatataatcacggagaa
aactcgtgttggactaaacactgtgaaaaatggaatattccattcatggcctttaaagtg
attcttccagacacagttctaaaaagaagcaatttgccggatacttttggtggttttctt
ttggatattcagattccatatgtgttttttgcatctgaaggacttcttaatactccagaa
atacttcagttgcttgaatccaactataacatcaccctagtggagagatgctgcagtgag
tcactgaaattctttggagggacggagtgctatgtagtagtgacagttgatgaacacact
gccataattttgcaggatctagaagaactgaattgtgaaaaggcatcagacaacatcatt
atgagactgatggcattgtcattccagtacagctcttgttgggtaattttatatgccagg
aaaacattgagctcagagtactatcttacagaaaagacacttcatcacctagcactgatt
tatgcagctttagtttcatttgggctaaaatcagaagaactggatgtaaagcttgtaatt
gcccctggagtagaagagactgcagtgataattcgacaaattgctgaccacaacttaatg
acctcgaagagagatcctcatgaatggttggataaatcctggcttcaagtttcaccatct
aaggaagaaatgtatttacttgattttccatgtattagtccattggtggctcagctcatg
ttaaataaaggaccttctcttcactggatattattagcaactctttgtcagcttcaggaa
ctcctacctgaagttccagaaaaagtgttaaagcatttctgtgacatcacttccttattc
aagattagttcttcttccataacatcacctcgaatttcatcacctgaggaaactatgaat
cagagtagaaccttcccttctcagagttcagcttctggttcttcacactctgtcattcaa
gaacacactgaatattgccagtacccagacttagaagagactgtgcagaaagacacaaac
accgcttcagattacaactcttgctttgtgggactaagggaaagagaaaggccatgcgtt
ttaccatctgtgacttcttacagacagaccagctattggaaagactccagttgtaaccct
gatatagtacagaataatcccttcctgattaatatggaatcaaggaactcggctggtaac
tcctttctaaaccagaatgattcacagacagatgtcttttctctgggtctaacacaaatg
aattgtgaaaccagaatatcaccaatcaacaatcaaaagagagttgcctctaattttata
aattctcagcaaaagggaacacatgaaacaaaaagacctataaataaagaagtatctgcc
cctatgttttcattagaatactctcaacctcctgctcattggaactataagaaaaatgta
tgggaacaagagaatcactctttcaatttacaatgcagtgcagagcagactatgtatgac
aaatggtactctcagaaagaaaacctgtacactattcagcaaaagtgtctatcaaatgag
ttgggctccacaggcaaaagttcaaatgctgagactcatgagactttctgggaagaatta
ccatctgtccccggtttggatttattttgttcgtctgatcctaacctaaatcaaaaagaa
ttcaacagtctttatttccaccaaagagatggaacatgtttaggacagaaaaggcatgct
gaattttcatctaactcaggagaccagaaatcattaacagagtccacgtgcttacaacga
ccacaatccaaaaaacagcgtctagtgtatgaaaaagtccccggtagagtcgatggacaa
actcgtctgaggttttattga
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