Artibeus jamaicensis (Jamaican fruit-eating bat): 119054886
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Entry
119054886 CDS
T07223
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajm03019
]
119054886
Enzymes [BR:
ajm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119054886
Messenger RNA biogenesis [BR:
ajm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119054886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-GeneID:
119054886
NCBI-ProteinID:
XP_037008820
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MGFEEHTEFLKEMSELILNEMPKAEYSSIFNDFVESDFFLIDGDSLLVTCICEKSLKQGQ
DLHFFYLVERYLVDLINKGGQFAIVFFKDAEYAYFDFPELLSLRTALILHLQHNNTIDVR
TTFSGCLSKEWETFLKESCPYFLIVADEGLNHLQTQLFNFLIIQSWAMKVNAVLSSGQAS
DILRLYAYFMPSKHSNRVFFKENKQQIENAYKALNKQLKECRVLAFKPLFGNLIWDNMME
EARETISLLKQLWPEGSDIRRVLCVISCSLSLRMHHHFLENRKKTTSCQETNIQQGESNC
LSLQEIEDLCKLHCLSVVFLLHLPLPQRACIRSITSRWIKNIQAFLKMKKWCEHFILSNI
DTFEFWNLNLIHLCDLSDELLLKNIAFYYENENVQGLQMSLGDVIMKDYEYLWNAVSKLV
RKFDVGQPFPLRTTKLNFLKKNPLTIKDSSKEKMPSLGFIPMSSEVIDKFAGDILKDLPF
LKRDDPRVTALVKHKEFDELLHWHSRRPLSDDYDRTKRQFDEKSRDPYVLRSVQKYHVFQ
RFYGSSLESITSRIIVTQNIKPKKNFSVPKSKKANETKAEIIARENKKRLLAKEELKEEE
KWNVLSFSIEEKMKENLNYGIQNLEDFLKSCKSNSVKYRVEMTGLTACLKAWKEHCRSQG
RGENTKDLSIAVQMMKRIHSLMEKYPELLQEADQQLIARCLKYLGFDDLASSLYPTEVAG
DDMKEKKKNKYSVGIGPIRFQLQYMGHHLIRDERKDPDPRVQDFIPDTWQRELLDVVDNN
ESAVIVAPTSSGKTYVSYYCMEKVLKESQEGVVVYVAPTKALVNQVAATVQNRYTKTMPD
GECLCGVFTRDYRHNALNCQVLITVPACLEILLLAPHRQKWVKRIRYVIFDEVHCLGGEI
GAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSVKRYWKQADSVIEQNIAAKRSAGSR
ANYHKDYSQRKQSYKVRLVLYGERYNDLEKHVCSVKHNDIHFEHFHPCAVLTTDHIERYG
FPSDLILSPRETIELYDSMFECWESWPRAQELCPENFIHFKNKIVIKKMDARKYEESLKA
ELANWIKNGNVEEAKMVLKNLSPDLALSSENMTQMFPLLVEKLKKMEKLPAIFFLFNLGD
VENRAKSVSTFLKNKQERERPPKADKEAHDMATKLRKVKKSIEKQKTIEEKSQKKPRKMD
KSLIYEAEHDNLLRNLEKNLEIPQECTYADQKAVSTEMLQMVFDRVKFTRKGAELKALAE
RGVGYHHSALNFKEKQLVEILFRKGFVRVVTATGTLALGINMPCKSVVFAQNSIYLDALN
YRQMSGRAGRRGQDLMGDVYFFDIPLPKIEKLIKSNVPELRGQFPFSITFVLRLMLLAAK
GDDPEDAKAKVLSVLKHSLLSFKQPRTVEMLKLYFLFSLQLLVKEGYLNQEGNPIGFAGL
VSHLHYHEPSNFVFVSFLVSGLFHKLCQPTHKGSKHFSQDVMEKLVLVLANLFGRRYFPA
KFQDANVKFYQSKVFLEDLPKDFNAALHKYNMTVTKDFASFLLVVSKLADMKQEYQLPLS
KINFMGKECEDSQLVSHLMSCKEGRRAISPFVCLSGNSDGDLLQPETPDHVILRTIGISH
TQAPLLWPQKYDRQGRRMPLNAYALDFYKHGSLMGLVQDNRMNESEAYWLLKDFSLTIQS
ISVSLHELCENEEDNVVLAFEQLSETFSEKLRKV
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgaagaacatacagagtttttaaaggaaatgtcagagttaattttgaatgaa
atgccaaaagctgaatattccagtatattcaatgattttgtggaatctgatttttttctg
attgatggagattcattacttgtcacatgcatatgtgaaaaatcgttaaaacaggggcag
gatctccacttcttctatctggttgaacgctaccttgtggatctcattaataaaggagga
cagtttgccatagttttcttcaaggatgctgagtatgcatatttcgacttccctgaactt
ctttctttgagaacagccttaattcttcatcttcagcataataacaccattgatgttcga
acaacattttctggatgtttatcaaaagaatgggaaactttcttgaaagagagttgccca
tatttcctgatagttgcagatgaaggcttgaatcatctacaaacacagcttttcaacttt
ttaatcattcagtcttgggcaatgaaggtcaatgctgtgctctcctcagggcaagcgtct
gatattcttcgactgtatgcgtattttatgccaagcaagcacagtaaccgagtgtttttc
aaggagaataaacagcagattgagaatgcttataaagccctgaataaacagttgaaagaa
tgtagagttcttgcattcaaacctctttttggaaatttaatatgggacaatatgatggaa
gaggcacgggaaactatctctctgcttaagcagctctggccagaaggatctgacattcgg
cgtgttctttgtgttatttcatgctcattgtctttgagaatgcaccaccatttcctagaa
aatagaaagaagactacctcttgtcaggaaactaacatccaacagggggaaagtaattgc
ttaagcctgcaagagatagaagatttgtgtaaactgcattgtctcagtgtggtttttcta
ctccacttacctcttccccaaagagcttgtattcgatccatcacttcccgttggattaag
aatatccaggccttcctaaaaatgaaaaagtggtgtgaacattttatcctaagtaatata
gacacttttgaattttggaatctgaatttaattcacctttgcgacttaagcgatgaactt
ttgttgaagaatattgctttttactatgaaaatgaaaatgttcaaggcctacaaatgagt
ttgggggatgtcattatgaaggattatgaatatctctggaatgcggtatcgaagttggtg
agaaagtttgatgttggacagccatttcctctgagaacaacaaaacttaattttcttaaa
aagaatccattaacaatcaaagattcctccaaggaaaagatgcccagtttgggttttatt
ccaatgtcatctgaagtgattgataaatttgctggagacattttgaaagatttgcctttc
ctgaagagggatgaccctcgtgtaaccgcgctggtgaaacacaaggaatttgatgaactc
ctgcactggcattcgcgtaggcccctcagcgatgattacgaccggaccaagcgccagttt
gacgaaaaatctagagatccttatgttcttagaagtgtgcaaaagtatcatgtttttcaa
cgattttatggaagttcattagaatcgatcacttccagaatcatcgtaactcaaaatatc
aagccgaagaagaatttcagtgtacccaagagcaaaaaggcaaatgagacaaaggctgaa
ataattgctagagagaataagaagaggttattagccaaggaagaactgaaagaagaggaa
aaatggaatgttctgtcattttccattgaggaaaaaatgaaagagaatttaaactatgga
atacagaacctggaagattttttgaaatcatgtaaaagtaactcagtgaaatatcgagtt
gaaatgactgggttaactgcttgcttgaaagcatggaaagaacattgtagaagccaagga
agaggtgaaaacacaaaagatttaagtatagctgttcaaatgatgaaaaggattcactcc
ttgatggaaaaatacccagaacttttgcaagaggcagatcagcaactcattgccagatgc
cttaaatatttaggatttgatgatttggcaagttctttatatccaactgaggttgcagga
gatgacatgaaagagaagaaaaagaataaatattcagttggcattgggcccattcggttc
caactgcaatatatgggtcatcatttgatacgagatgagagaaaagacccggatcccaga
gttcaggactttattcctgacacgtggcagcgagagctccttgatgttgtggataataat
gaatcagctgtgattgttgccccaacgtcctcaggcaaaacctatgtttcctactactgc
atggagaaagtgctgaaggagagtcaagaaggggtcgttgtgtatgttgcaccaaccaag
gcccttgttaatcaagtggcagcaactgttcagaatcgttacaccaaaactatgccagat
ggcgaatgcctgtgtggtgttttcacaagggactatcgtcacaatgccctaaactgtcag
gtacttattacagtgcctgcctgccttgaaattctgctgttagctcctcatcgccaaaaa
tgggtgaaaaggatcagatacgttatatttgatgaggtccattgtcttgggggagaaatt
ggagcggaaatctgggagcacctccttgtcatgatccgatgtccctttctggctctttcg
gctacaataagcaaccctgagcatctcaccgagtggctacaatcagtgaaacggtactgg
aaacaagcagacagtgtcatagaacaaaatattgctgctaaaagaagtgctggctctcgt
gccaattaccacaaggactactctcaaaggaagcaatcatataaagttagacttgtgctg
tatggggagagatacaatgatttagagaagcatgtatgttcagtaaaacacaacgatatt
cattttgaacattttcatccatgcgctgtgctaacgacagatcatatcgaaagatatgga
ttcccttctgatcttattctttcaccccgagaaaccattgaactttatgacagcatgttt
gaatgctgggaaagttggcccagggcccaggagctgtgtccagagaacttcattcatttt
aagaataaaatagtcattaagaagatggatgctagaaaatatgaagagagcttaaaggca
gaattagcaaattggattaaaaatggcaatgtagaggaggccaaaatggtcctgaagaat
cttagtcctgatttggctcttagttcagaaaatatgacacagatgtttccacttcttgtt
gaaaagctgaagaaaatggagaagttaccagcgatattttttttattcaatttaggagat
gtagagaacagagctaaaagtgtgagcacttttttgaagaacaagcaagagagagaaagg
cctcccaaagctgataaagaagcccacgatatggctaccaaacttcgaaaagttaaaaaa
tcgattgagaaacaaaagacaatagaggaaaaaagccagaagaagcccagaaaaatggat
aaaagcctaatatatgaagctgaacatgataatctactcaggaatttagagaagaacctg
gagatcccacaggagtgtacatatgctgatcaaaaggcagtgagcacggagatgttgcag
atggtgttcgatcgagtaaaattcacaagaaaaggtgcagaactgaaggctttggcagaa
aggggtgtcggatatcatcacagtgctttgaacttcaaagaaaagcagttagttgaaatt
ctctttaggaaaggatttgttagggtggtgaccgctaccgggacacttgctttaggaata
aacatgccttgtaaatctgtggtttttgctcaaaactcaatctatcttgatgctttaaat
tacagacagatgtcaggacgtgctggaagacgaggccaagacctgatgggagatgtctat
ttctttgatattccattgcccaaaatagaaaaactcataaaatccaatgttcctgaacta
agaggacagttccccttcagcatcacctttgttctacgactcatgctcctggctgcgaag
ggagatgacccggaggacgccaaggcgaaggtgctgtcagtgctgaagcattcattgctg
tccttcaagcaacccagaaccgtggagatgctaaaactttacttcttgttttctctgcag
ttactggtgaaggagggctatttaaatcaagaaggtaatccgatagggtttgctggactt
gtatcacatttgcattaccacgagccttcgaattttgtttttgtcagttttcttgtaagt
ggccttttccataagctctgtcagccaacccacaaaggctcaaaacatttttctcaagat
gttatggaaaagcttgtgttagtattggcaaatctgtttggaagaagatattttccagca
aagttccaagatgctaatgtcaaattttatcaatcaaaggtgttccttgaggacctccct
aaggattttaatgctgctttacataagtataacatgacagttacaaaggactttgcctcc
tttctactagttgtttccaaattggctgatatgaaacaggaatatcaactcccattgtca
aaaataaacttcatgggtaaagagtgtgaagactcccaacttgtgtctcacttgatgagc
tgcaaggaaggaagaagagcgatctctccattcgtttgtctctctgggaactctgatggt
gatttgcttcaaccagaaactccagaccatgtcattctgcgcaccattggtatcagtcac
actcaggctcctttgctttggccacagaagtatgatagacaaggaaggagaatgccgctc
aatgcctatgcacttgacttctataaacacggttccctgatgggattagtccaggacaac
aggatgaatgaaagtgaagcttattggttgctaaaagatttttcactcaccattcaatct
atcagtgtttctttacatgagctatgcgaaaatgaagaagacaatgtggtcctggcattt
gaacaactgagtgaaaccttttctgaaaaacttaggaaagtctaa
DBGET
integrated database retrieval system
