Artibeus jamaicensis (Jamaican fruit-eating bat): 119058059
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Entry
119058059 CDS
T07223
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119058059 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajm03041
]
119058059 (PRPF40A)
Spliceosome [BR:
ajm03041
]
Complex A
U1 snRNP components
U1 related factors
119058059 (PRPF40A)
Complex B
119058059 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
DUF5803
Motif
Other DBs
NCBI-GeneID:
119058059
NCBI-ProteinID:
XP_037012909
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MQATPSEAEAGGESPQSCVPAAHSDWTAGKPVSLLAPLIPPRSAGQPLTLSPSGRQPLRS
LLVGICSGSGRRRSSLSQTMRPGTGAERGGLMVSEMESHPPSRGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTSGAKSMWTEHKSPDGRTYYYNTE
TKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQ
NTIVAGSLITKSNLHAMIKAEESSKQEECTTASAAPVPTTEIPTTMSTMAAAEAAAAVVA
AAAAAAAAAAAANASASSSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQL
TSTPAIQDQSVEVSSNAGEETSKETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKEL
LKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEA
KESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQA
KQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEE
HIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSD
IRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDF
VAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATP
PIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSK
KHHRKRSRSRSGSDSDDDDSHTKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKR
RHKSDSPESDAEREKDKKDKDRESEKDRTRQRSESKHKSPKKKTGKDSSGNWDTSGSELS
EGELEKRRRTLLEQLDDDQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagtgaggctgaggctgggggcgaatcgccgcagagctgcgtgccg
gcagcgcactctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagtgccgggcagcctttaacccttagccccagcgggcgccagccactcagatcg
cttcttgttggtatatgcagcggcagtggccgccggcggagcagtctgagccagacgatg
aggccagggacgggagccgagcgaggaggcctcatggtgagtgaaatggagagccatcct
ccctcgcggggtcctggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcatcctggcatg
cattatgccccaatgggaatgcacccaatgggtcagagagcaaatatgcctcctgtacct
catggaatgatgccacaaatgatgccccccatgggaggtccgccaatgggtcaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacatcaggcgca
aaatcaatgtggactgaacataagtcacctgatggaaggacttactactacaatactgaa
acaaaacagtctacttgggagaaaccggatgatcttaaaacacctgctgagcaactttta
tctaaatgcccttggaaagagtacaaatctgactctggaaagccatactattacaattct
caaacaaaagaatcccgttgggccaaacctaaagaacttgaggatcttgaaggataccag
aataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagct
gaagaaagcagtaagcaagaagagtgcaccacagcatcagcagccccagttcctacaaca
gaaattccgaccacgatgagcaccatggctgctgcagaggcagcagctgctgttgttgca
gctgccgctgctgctgcagctgccgctgcggctgccaatgccagtgcctccagctctgct
tctaatactgtcggtggaactgttccagttgttcctgagcctgaagttacttcaattgtt
gctactgttgtagataatgaaaacacagtaacaatttcaactgaagagcaagcacaactt
actagtactcctgctattcaagatcaaagtgttgaagtgtccagtaatgctggagaagag
acatctaaggaaactgtagctgattttactcccaaaaaagaagaggaagaaagccaacca
gcaaaaaaaacatatacttggaatacaaaagaggaggcaaagcaagcatttaaagaatta
ttgaaagaaaagcgggtaccatctaatgcttcatgggagcaagctatgaaaatgatcata
aatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgcc
tataaagttcagacagagaaagaagaaaaagaagaagcaagatcaaagtacaaagaagct
aaggaatcctttcagcgttttctagaaaatcatgagaaaatgacatccacaaccagatac
aaaaaagcagagcaaatgtttggtgagatggaagtctggaatgcaatatcggaacgtgac
cgtctcgaaatctatgaagatgttttattctttctttcaaagaaagaaaaggaacaagcg
aagcagttgcgaaaaagaaattgggaagccttaaaaaacatacttgacaacatggctaat
gtaacatactctactacttggtcagaagcccagcagtatctcatggataatccaactttt
gcagaagatgaggaattgcagaacatggataaagaagatgcattaatttgctttgaagaa
catatccgggctttagaaaaggaagaagaagaagaaaaacagaagagtttgctgagagaa
cggagacggcagcgtaaaaatagagaatcttttcagatatttttagatgaactgcatgaa
catggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttctgac
attaggttcactaatatgcttggtcagcccgttttttcattaggatcaactgcacttgac
cttttcaagttttatgttgaggatcttaaagcacgctatcatgatgagaagaagataata
aaagacattttaaaggataaaggatttgtagttgaagtaaatactacttttgaagacttt
gtggcaataatcagttcaactaaaagatcaactacattagatgctggaaatattaagttg
gcttttaatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggag
gctcgaaagatgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctactcct
ccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagccagca
tttgaggatataactctagagtctgaaagaaaacgaatatttaaagatttcatgcatgta
cttgagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaagaaatccaaa
aaacaccacagaaaacgttcccgctctcgatcggggtcagattcagatgacgatgacagc
catacaaagaaaaaaagacaacgatcagaatctcgttctgcttcagaacattcttctagt
gccgagtctgagagaagttacaagaagtcaaaaaaacataagaagaaaagcaagaagagg
agacataaatctgactctccagagtcagatgctgagcgagagaaggataaaaaagataaa
gatcgggaaagtgagaaagacagaactagacaaagatctgaatcaaaacacaaatcacct
aagaaaaagactggaaaggattcttctggtaactgggatacttctggcagtgaactgagt
gaaggggagttggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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