Artibeus jamaicensis (Jamaican fruit-eating bat): 119058744
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Entry
119058744 CDS
T07223
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119058744 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajm04147
]
119058744 (COL18A1)
00535 Proteoglycans [BR:
ajm00535
]
119058744 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
ajm00536
]
119058744 (COL18A1)
Exosome [BR:
ajm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119058744 (COL18A1)
Proteoglycans [BR:
ajm00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119058744 (COL18A1)
Glycosaminoglycan binding proteins [BR:
ajm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119058744 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
LDL
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
119058744
NCBI-ProteinID:
XP_037014063
LinkDB
All DBs
Position
Unknown
AA seq
1758 aa
AA seq
DB search
MAPDPSGRLSLPLQLLLLACCFTASWADLLTWLWSSNQTNENAASLVSVPLGSPPVQPTE
GITTRVGLQDSPTEQGTASASPGPPLEELEDGQGKASTSPPASNASPDTKEENIAGVGAK
ILNVAMGIRSFVQLWDDTTPTENASKMGTLAPATSTDPLTLPGPSSTPPENGTILWLTSG
ALNSPDTKTEGGSLPVPTQPPPSLDRPWAMLSVPSVPPRSSGRTLSSVLGRDLPWGSLQS
SGWPPDLDGKGLLPEAAHPGQRHQHPGSLKRTPLLLPLVTGSLGTHAAPSALSPDPPAGL
SQISLSALPGDSGAWVPHVANSVGPGLPNVFALLGSHRPTPAVPPLRRASSRCLPLPPSL
PVCGSLGIRRSWLPNHLHHLSGEEVLVAAQAWEGLLQSHCHHFLAWFFCLLLAPPCGPGP
LPALPPCRQFCEVLEDACWSHLDGGRLPVTCASLPAQEDGYCVFIGPAAEKVGAEVGLLQ
LLGEPLPPEITQTDDPDVGPAYIFGSDANSGQVAQYHFPSPFFRDFSLLFHVRPATEDAG
VLFAITDTAQAVISVGVKLSGVSDGHQHIQLLYTEPGAAQTHTAASFRLPAFAGQWTRFA
LSVEGDTVTLFVDCEEVQSVPLVRSPRGLELEPGSGLFVAQGGDADPDKFQGMIAELRVR
RDPQVSPMHCLEDDDDDDDGASGDFGSGQEETRELLRKEAGTSLKPSFPEAPPVTSPPLA
GGNISEDSRTEEIEEQSTVSVLGAHTLPGSNTVTTLDRSVQSPEDILQEGLPGPVVQSPD
ARAIPGPQGPPGLPGLPGKDGAPGRDGKPGGPGEDGKPGDIGPQGFPGTPGDMGPKGEKG
DPGVGPRGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFSGDLESLRGPRGLPGPPGPPGV
PGLPGEPGRFGVNSSVIPGPAGLPGVPGRDGHPGPPGPPGSPGVPGKDGRPGETGPKGSL
GKEGAPGPKGSKGDPGPIGTPGESGLAGPPGPAGPQGPPGPPGPPGPPGPGLPAGFDDME
GSGGPRIQDDTEGSGGPFWLGARSADGLQGPPGRPGVKGDPGIPGLPGTKGEVGAGGPPG
FPGLPGREGVDGAQGPKGEKGTQGEKGDTGKDGVGQPGPPGPPGPPGPVVYVSEQDRAVA
MTHGVKGQPGYAGLPGPAGPKGDLGSRGQQGPPGPKGEKGEPGTVSGPDGRALASAQKGA
KGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGFKGEKGEPGDAIGIGTRCPPGPPGP
PGPPGLPGPPSLPRTPVYDSNAFLESGPAGPRGLPGHQGPSGPKGDKGEVGPPGPPGQFP
FDLFQLEAEVKGEKGDRGDGGQKGEKGEPGGGGFFGSSLPGPPGPPGFPGAPGPKGESIR
GQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPGPPSFPGPYRQPVSVPGPPGPPGPPGPP
GTMGSSSGVRIWPTYQTMLDKVPEVPEGWLMFVAEREELYVRVRNGFRKVLLEARTPLPR
GTDNEVAALRPPLVQLHEGNPHPRWELPPSTARPWRADDILARPPRLLDPQPYPGVPHHG
SYVHPRPARPTGVPAHTHQDFHPVLHLVALNGPQPGGLRGIRGADLQCFQQARAAGLAGT
FRAFLSSRLQDLYSIVRRADRATVPIVNLWDEELFPSWEALFSGSRGQLKPGARILSFDG
RDVLQHPAWPQKSVWHGSDPSGRRLTESYCETWRTEATTATGQASSLLAGRLLEQKAASC
HNAFIVLCIENSFMTSSS
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcggccgcctcagcttgccgctgcagctgctgctgctcgcctgc
tgcttcaccgcctcctgggctgatctgctgacctggctgtggtcgtccaatcagacgaat
gagaacgcagcctcgctggtctctgtgcccctgggcagcccacctgtacagcccacagaa
ggtatcaccacacgtgtgggcctgcaggacagccccaccgagcaggggacagcttctgcc
agccctgggccacccctggaggagctggaagatggccagggcaaggcctccacttcccct
cctgcctctaatgcgagcccagacacgaaggaggagaacattgctggcgttggtgccaag
atcctgaacgtggccatgggcatccggagcttcgtccagctgtgggatgataccaccccc
actgagaatgcttccaagatggggactctggcacctgcaacctccacagaccccctcacc
ctccctgggccatccagcacccctccggagaatgggaccattctctggctgaccagcggg
gccctgaactcaccggacaccaagactgagggtggtagcctgccagtgcccacccagcca
ccaccctccctggacaggccctgggcgatgctcagcgtgccttcggtgccaccgaggtcc
tcaggtagaactctctcctccgtgctgggcagggaccttccctgggggagcctgcagtcc
tcaggttggcccccggacctggatggcaaaggactcttgcccgaggcagcccatcccggc
cagcggcaccaacaccccggcagcctcaagcgcactccacttctgcttcccctggtgacg
ggttccctgggcacgcacgctgccccctcggctctctcccctgaccctcctgccggtctg
tctcagatctcactctcagctttacctggggacagtggtgcttgggttcctcacgtggct
aattctgtgggacctggtcttcctaatgtcttcgcactgctcgggtcccaccgaccgacc
ccggcagtgccgcctctgcgccgtgcctccagccgctgcctgcccctgccgccctccctg
ccggtctgcggcagcctgggcatcaggcgctcctggctgcccaaccacctccaccacctg
agcggagaggaggtgctggtggccgctcaggcctgggagggcctcctccagtcacactgc
caccacttcctcgcctggttcttctgcctgctgttggccccgccctgtggccctggcccc
ctgcccgccctgccaccctgccgccagttctgcgaggtcctggaggatgcgtgctggagc
cacttggacgggggcaggctgccggtcacctgtgcctcgctcccagcccaggaagacggg
tactgtgtgttcattgggccggctgcagagaaagtgggcgcagaggtggggctcctccag
ctgctcggggagccactgcccccagagatcacccagactgatgaccctgatgtgggacca
gcctacatctttggctctgatgccaacagcggtcaggtggcccagtaccacttccccagc
ccgttcttccgtgacttctcgctactcttccacgtgcggccagccactgaggatgcaggg
gtactcttcgccatcacggatacagcccaggcagtgatctcagtgggcgtgaagctgtcg
ggcgtgagcgacggccaccagcatatccagctcctgtacaccgagcctggggcggcccag
acgcacacggctgcgagctttcgcctacctgcctttgccggccagtggacacgctttgca
ctcagtgtggaaggtgacactgtgacactctttgtggactgtgaggaggtccagtcggtg
cctttggtgcgatctccacgaggcctggagctggagcccggctccggcctctttgtggct
cagggtggagacgcggaccccgacaagttccaggggatgatcgcggagctgagggtgcgc
agggacccccaagtgagccccatgcactgcctggaggacgatgacgatgatgacgacggg
gcgtcaggagacttcggaagtgggcaggaggagacccgggagcttctccggaaggaagcg
ggcacgtccctaaaacccagcttccctgaggctcccccggtcacttctcctcccttggct
ggaggcaacatctcagaagattccagaacagaagaaatcgaggagcaatccactgtgtct
gtattaggagctcacacccttcctggctcgaatacagtcaccaccttggacaggagtgtc
cagagccctgaggacatcctgcaagagggtctcccaggcccagtggtgcagagccctgat
gcacgggctatccctgggccacagggaccccctggactcccggggctaccagggaaggat
ggtgcccccggaagggatgggaagcccggcggccctggggaagacggaaaacctggtgac
attggaccacagggcttcccgggaaccccaggagacatgggtcccaagggtgagaagggg
gatcctggggttgggcccagaggacccccaggaccccaagggcccccagggccaccagga
ccttccttcaggcatgacaagctgaccttcattgacatggaggggtccggcttcagcggt
gacctggagagccttcgaggcccaagaggtctccctggccccccggggcctcctggtgtc
ccaggcctgcctggagagccaggccgcttcggggtgaacagctcggtcatcccaggaccc
gccggccttcctggtgtgcctgggcgggatggacaccctgggccccccggccccccggga
tctccaggtgttccagggaaagatgggcgaccaggagagaccggcccgaaaggcagcctt
ggcaaagagggcgccccaggacctaagggaagcaagggagaccctggtcccatcggcact
cctggagagagcggcttggcaggaccacctggaccagcaggaccgcaagggccccccggg
cctcctgggccccctgggcctccgggaccaggacttcctgcaggatttgatgacatggaa
ggctccgggggacccagaatccaggatgacacggaaggctccgggggacccttctggctg
ggagcccgaagtgctgatgggctgcagggaccgcctggcaggcctggagtcaagggggat
cctggaattcctgggctaccggggaccaagggagaagtcggtgcaggcggaccccctggg
tttcccggcctcccgggcagagaaggtgtggacggagcccagggaccaaaaggagaaaaa
gggacccagggagagaaaggagacacagggaaggacggagtggggcagccggggcccccc
gggccccccggacctccagggcctgtcgtctatgtgtcggagcaggacagagcagtggcc
atgacccatggagtcaagggccagccggggtatgcgggactccctgggccagccgggcca
aagggagacctgggctccagaggccagcagggccccccgggacccaagggtgagaagggt
gagccgggcacagtctccggccctgacggcagagcgctggcctcagcccagaaaggagcc
aagggggagcccggcttccgaggacccccgggtccatatgggcggcccgggcacaaggga
gagattggcttccccggacgaccgggtcgtcctgggatgaacggattcaaaggggagaaa
ggggagccaggagacgccatcggaattggtacaagatgtccacctggccccccagggcct
ccagggcccccagggcttccagggcccccatctcttccccggacccctgtctatgacagc
aacgcttttctggagtctggccctgcgggacctcggggattgccagggcaccaggggcct
tctggaccaaagggtgacaagggagaagtgggcccgcccggaccaccagggcagttcccc
tttgacctcttccagctggaggctgaagtaaagggggagaagggtgaccgaggggacggt
gggcagaaaggagagaagggcgagcctggaggtggtggcttcttcggctccagtctgcct
ggaccccctggcccgccaggcttccctggggctccgggtcccaaaggagaaagcatcaga
ggccagccaggcccacctggacctcaggggccccccggcattggctacgaagggcgccag
gggcctcctgggccccctggcccaccagggcctccagggcccccttccttccccggccct
taccggcagcctgtcagcgttcctggacccccaggcccacctgggccccctgggcccccc
gggactatgggaagctcctcaggggtgaggatctggcccacgtaccagaccatgctggac
aaggtgcctgaggtgccagagggctggctcatgttcgtggctgagagggaggagctgtat
gtccgtgtccgaaatgggttccggaaggtcctgctggaggctcggacgcccctcccacgt
gggacggacaacgaggtggctgccttgcggccacccctggtgcagctgcacgagggtaac
ccccacccccggtgggaactgcccccctccactgcacggccctggcgggcagatgacatc
ctggccagaccccctcggctgctggacccccagccctaccctggagtcccacaccacggc
tcctacgtgcacccccggccagcccgccccactggtgttcctgcccacacccaccaggac
ttccatccagtgctgcacctggttgcactcaatgggccacagcctggtggcctacgtggc
atccgtggcgccgacctccagtgcttccagcaggcgcgtgctgcgggtctggcgggcacc
ttccgcgccttcttgtcatcacgcctacaggacctctacagcatcgtgcgtcgtgctgac
cgtgccactgtgcccatcgtcaacctctgggacgaggagctgtttcccagctgggaggcc
ttgttttcgggctcccggggccagctaaagcccggtgcccgcatcctctccttcgacggc
agagacgtgctgcaacaccccgcctggccacagaagagtgtgtggcacggctcagacccc
agcgggcgccggctgactgagagctactgcgagacctggcggactgaggccacgacagcc
acgggccaggcctcctcgttgctggcaggcaggctattggagcagaaagccgcaagctgc
cacaatgccttcatcgtcctctgcatcgagaacagcttcatgacctcctccagttag
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integrated database retrieval system
