Artibeus jamaicensis (Jamaican fruit-eating bat): 119059037
Help
Entry
119059037 CDS
T07223
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119059037 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajm03021
]
119059037 (SETX)
Enzymes [BR:
ajm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119059037 (SETX)
5.6.2.5 RNA 5'-3' helicase
119059037 (SETX)
Transcription machinery [BR:
ajm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119059037 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SEN1_N
AAA_19
AAA_30
UvrD-helicase
Viral_helicase1
AAA_22
AAA_16
nSTAND3
ResIII
SLFN-g3_helicase
NAT10_TcmA_helicase
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
119059037
NCBI-ProteinID:
XP_037014483
LinkDB
All DBs
Position
Unknown
AA seq
2773 aa
AA seq
DB search
MRGLTQRDKSRPRRLASSCTISRNTLLGPEFGYIGRQILTLSQARPGIATERITSLFRMS
TCCWCTPGGACTTDFLQRYAAQGGEFQAAGEFQTADEDLCYCLECVIEYHRARDELPVLH
EVLWELETLRLISHFEKSMRGEIEDDDELYIVDNNGEAQLFDCTGQDFENKLRVPILEIL
RYPYLLLHERVNELCVEALCRMEQANCSFQVFEKQPGIYLFLVHPNEMVRRWAILTAKGL
GKVERDDYYDLQEVLTCLFRVIELGLLENPDIYTSSVLEKGKLVILPSHMYDTTSYKNYW
LGICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSQEDSEDPFWPALHCFMVILD
RLGSKVWGQLIDPIEAFQTIINNSSYNREIQNIRNSSARTKSEPESCLDDMVTCSQIVYN
YNPEKTKKDSGWRSAICPDYCPNMYEEMETLANVLQSDIGQDMRVHNSTFLWFIPFVQSL
MDLKDLGVVYILEVIHHLYSQVKDVLSQTVVTCDKVTEFFFLILVSVIELHRSRKCLHLL
WVSSQQWVEAVVKCAKLPTTAFVRSSEKSASSGSKGTAVTSLSLHPMPSNSVQLACVQLI
RSLLKEGCQLGQQTLYKRFWDKLNLFLRGNLSLGWQLTSQETQELQTCLKQIIRNIRLKV
PQHTTLAELAPSCKTPPATCVKEESEQAGKAGERDLRCPESPTSSKPVRANGCQAQQSSS
MLSKASDPVEEDNEKNYIKNLKLEGHLSAESCLKQSSKNLFPERAHDQVKGKQKSVKDNS
SGTPQNCTARNGPERGCDQGAVPSMRLSADSSTDALEKGSTPKEGFSSQDDVLGRPSKAK
TRAQKNEICAKLSRVIKKQHRKSALVTSTVKLEGDLTESNVENVCSRKDTGGQKGDSFLH
NLTLDPDDILENTNGGHGSPNSMLLKKKQLKMEELGGFSSHENDCQIQECPVGTEDSALF
AEVTDTSMHRASPFKGPMSSPESRRKKVSKGADQVSSDLIQQLPSITLQSDILTDSQVDR
DLHKLSLMAQASVTTFPSDSAPKSLPQLQRKVKDDEGFRANQNNVRETCCGQVIIISDSE
DSGDDEGIVGLEKHMKQNKMCAEEERPEQRASMADTHVGRKVTKEEKTNSPLEFEDSDSQ
VFEFESQKEVFSVWQDQQPDNKNSPQGDEKSSRWTPVADVTNDWGYDTDYPMSEDVTNKG
TEGTEHAQPQGSSTGKESCEVQKPKRKKVERPTAKNGVTPSSSVRNEDQSDIRNGSELTK
NNRSTGIRTSSKAGVQRTASVSLKKPSPKPCIYSKPVRRAPVPKTAKKTHSDTRRGQNKG
SHYISCRTTPLIVPPKKDRQCPEPASTVERLGLKKGRRRAFELSQRSLDCIVQLRDHGKT
VGVIDTRKKTKLISPQTLPVKDKRLLVSQDLQFQRQTRQRSKQGRQGLCDSKPASAARAG
PRAARSSDPVTPEPGRSGCSSRGGTGVSARSSGNQSAKRTSPERGPAHPRSPHVAAGACL
VDPCDSPVLSGRRPMDEVTVSTSEDAPGRRDLTGQHLEVAALKKAEPDDDDSDMEGNDLF
LTQHDPEDMDLCSQVQNNDDKLIEVVHGENRVQVEDSTLQPQLESLSSTKCKSQGCAETV
KTQGDCCSKHSEAKAADEEVFRKPGLPLSASKPLRPSTTKIFSSSSTSRTAHLSKSLESS
SALPALKNKSSGGRSALKVPQPAPPVSPKPVGEGKGLCNVRSSPVPPVSPKPVGEGKGLC
NVRSSPVPPVSPKPLGEVKGLCNVLSPTPSNSSRQVYKLPFGESKPLSSSLDSTSSESVS
DTFVKEVLKWKYEMFVNFDQCGLPASLCQTISRPVPVRFQDCSDYFKVFLPLMVVNTFET
VAQEWISSPNKEKFYELHLRKFPVEYKKYWEFVVSLEDCELAKQLHPKENDLVFLVPESQ
SGEKRDVEGNPIQGPREYHCAYVHKFRRTSVLRNGKYECFLCIQTQGDLPVNLSEFVKCV
VISSLVTTQRKLKAMMLLSGRNQLARAILNPNPMDFCTKDLLATTSERITAYLRDFNEEQ
KKAIETAYAMVKHSPAVAKICLIHGPPGTGKSKTIVGLLYRLLTERRGRFDENSNAKIKQ
NRVLVCAPSNAAVDELMKKIIVEFKERCKDKKNPMGNCGDINLVRLGPEKSINNEVLKFS
LDNQVSHRMKKDLPSYVQEMHRRKEYLDHQLDELSRQRALCRGGREMQRQELDERIAHVS
KERQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIV
DEAGQAGEVETLTPLIHRCNKLILVGDPKQLPPTVISLKAQEHGYDQSMMARFCKLLEEN
VEHNVSGRLPILQLSVQYRMHPDICLFPSNYVYGRSLKTHRMTETIRCSSEWPFQPYLVF
DVGDGLERRDNDSYVNVQEIKVVIELIKLLKDKRKDITYRNVGIITHYKAQKMMIQKELD
KEFEGKGLAEVDTVDAFQGRQKDCIIVTCVRANTVQGSIGFLASLQRLNVAITRAKYSLF
ILGHLRTLMDNQHWNHLIQDAQRRGAIIKTCDKNYKHDAAKILKLKPMLQRSLTHPPSLA
LEGFSLQGGSPSSRPDSEIIKALFASFLYATHHDPKDAAVTVAAMDPERPPVKDQLRDPR
LRRRMGLSSEAQGKCLRDPEPSSPQHQGATPPLGEPGFPASPQVLGSTVEWSTATGSIHR
PYVPCDPPAASTAATAPSVYDQEWGHSHQRDAGAFRNWDQEMPSPVSHHPKRNSGRDRRR
PEEEDSSSKKRKL
NT seq
8322 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcctgacccagcgggacaagagccgcccccgcaggttggcatccagttgcacc
atcagtagaaatactcttttggggccagagtttgggtacataggaaggcaaattctcacc
ctctcacaggcacgcccaggaatcgcgactgagaggatcacatctctgttcaggatgagc
acgtgctgctggtgcacgccgggcggcgcctgcaccaccgacttcctgcagcgctacgcg
gcccagggcggcgagttccaagcagcgggcgagttccagaccgcagacgaagacctctgc
tactgcttagagtgtgtgattgagtaccacagggcacgggacgagctgcctgtcttgcac
gaggttttatgggaattagaaaccctgcgtctcataagtcactttgagaagtctatgcgg
ggagagatcgaagacgacgacgaattgtacatagtggacaacaacggggaggcccagctg
ttcgactgcacgggccaggacttcgagaataagctgcgagtcccaatcctcgaaattctg
agatacccttacctgcttctccacgagcgtgtcaatgagttatgtgtggaagcgctttgt
cggatggagcaagcgaactgctccttccaggtgtttgagaaacagcctgggatctacttg
tttttggtccatcctaatgaaatggttcggcgttgggcgatcctgacagcaaaaggcttg
ggaaaagtggagcgagatgactattatgacttacaggaggttctgacatgcctcttcaga
gtcatcgagttggggcttttagaaaatccagacatctatacttcgtctgtcctcgagaag
ggtaaactggttatcctgccctcgcacatgtatgacactaccagctacaaaaactactgg
ctagggatctgcatgctgctgaccattctcgaggagcaggccatggactcgctgctgctg
ggctccgacaagcagaacgacttcatgcagtcaatactgcacaccatggagaggcagtcg
caggaggatagtgaagatcctttctggccagcattgcactgtttcatggtgattctggat
cgcctgggatccaaggtttggggtcaacttattgatccaattgaggcgtttcagaccatc
atcaacaactcgagctacaacagagagatccagaatatccggaacagctctgcgaggacc
aagtccgaaccagagtcatgtctggatgatatggtgacttgcagccagattgtatacaat
tacaatcctgaaaagaccaaaaaggactcggggtggagatcagccatttgcccggactat
tgcccgaacatgtatgaagaaatggagacattggccaatgtgctccagtcagatatcggt
caagacatgcgtgttcacaacagcacgtttctgtggttcatcccttttgttcagtccctc
atggaccttaaggaccttggtgtggtttatatactagaggttattcaccatctgtactcc
caagtcaaagatgtcctcagccaaacagttgtcacgtgtgacaaagtcactgaatttttt
ttcctgattttggtgtccgtgatcgagctccatagaagtcggaagtgcctgcacttgctc
tgggtcagctcccagcagtgggtggaggctgtcgtgaagtgcgccaagctccccaccacc
gcgttcgtgcggagttccgagaagtcggccagcagcggctccaagggaacagcagtgacg
tctctgtccctgcatccaatgccgtctaactcggtccagcttgcttgtgtgcagctgatt
agaagtcttcttaaagaaggttgtcagcttgggcagcaaactctttataagcgattctgg
gataaactcaacttattcctgcgagggaatttatctctaggttggcagctgactagtcag
gaaacccaagagctacaaacttgtttaaagcaaattatcagaaacatcagactcaaagta
cctcagcataccactttggcggagctggctccttcctgtaaaacccctcctgcgacttgt
gttaaagaagagagtgagcaggcagggaaggcgggggagagagacctgcgctgcccggag
agcccgacctcgtctaagcccgtgagagctaatgggtgtcaagcgcagcagagcagtagc
atgctaagcaaagcgagcgaccctgtagaagaggataacgagaagaattacataaaaaat
ttgaaactagagggccatctgtcagctgagtcatgcttaaagcagagtagtaaaaacctt
ttccctgaaagagcccacgaccaagttaaagggaagcagaagtctgtaaaagataattcc
tcaggtacaccacagaattgtactgcaagaaatggtccggaaaggggctgtgaccaagga
gcagttccgtccatgcgcctgtcggctgattccagcacagatgctctggagaaggggtcc
acgccaaaggagggtttctcttcacaggatgatgtccttggcaggccctcaaaggcaaaa
actagggcacagaaaaatgaaatctgtgctaagttatcacgtgtaataaagaagcaacat
aggaaaagtgctttggtcactagtactgtgaaattagaaggagacctgactgaatctaac
gttgagaatgtctgttcaaggaaagataccggaggtcagaaaggggatagcttcctacac
aatctcactttagaccctgatgatatcctggaaaacacaaatggagggcacggatctcct
aacagtatgttgctgaaaaagaaacaattgaagatggaagagttaggtggtttttcttcc
catgaaaacgattgtcagatacaggaatgtcctgtcggtactgaagattcggccttgttt
gcagaagtgaccgatacttccatgcatagagcatctccttttaaaggccctatgagttcg
cctgaatcaaggcgaaagaaagttagcaagggtgctgatcaggtttcttctgacttgata
caacagctccctagcatcactcttcagtctgacatcttaacagattctcaggtagacaga
gatctccacaaattatcattgatggctcaagccagtgttactacgtttccatcagattca
gctccaaaaagcttgccccagctacaaagaaaagtaaaagatgatgaaggtttcagagcc
aaccaaaataatgtcagggaaacctgctgtggacaagttatcattatttcagattccgaa
gatagtggtgatgacgaaggaattgtgggtttggagaaacatatgaaacaaaataaaatg
tgtgctgaggaggaacgtccagagcagcgtgcttcgatggccgatacgcacgtgggaagg
aaggtaacaaaagaagaaaagacaaattcccccttggagtttgaggactccgattctcag
gtttttgagtttgaaagccaaaaggaagtattttcggtttggcaagatcagcaaccagac
aacaagaattcccctcaaggggatgaaaaaagttcgcgttggacgccggtagcagacgtc
acaaatgactggggctatgacacagactaccccatgtccgaagacgtcactaacaaagga
acagagggcactgaacatgcacagccacaaggcagtagtactggtaaggaatcctgtgaa
gtccaaaaacctaaaagaaaaaaagttgaaagaccaacggctaaaaatggtgtaacgcct
tcatcttctgtcagaaatgaggaccagtctgacattcgtaatgggagtgagctaaccaaa
aataacagaagtacaggcataaggacctcttccaaagcaggtgttcagagaaccgcctcg
gtttccctgaagaagccttcgccaaagccttgtatttattccaaacccgttcggagagcc
ccagttcccaaaactgctaagaaaacacattcagataccagaagagggcagaataagggc
tcccattacataagctgcaggacaacccctctcatagtgccaccaaagaaagaccgccag
tgtcccgagccagcctccactgtggagcggctcggcctgaagaagggccgtcgccgggct
ttcgagctgtcgcagcggtctttggactgcatagtgcagctacgtgaccacggcaaaacc
gtcggcgtcattgacacccgaaaaaagactaaactgatttctcctcagactcttcctgtg
aaagacaagagactgcttgtgagtcaagatcttcagtttcaaaggcagacgagacagaga
tctaaacaaggcagacaaggactttgtgattccaaacccgcgagtgctgcgagagcaggg
ccgcgagcggcacggagctctgacccagtcacgccagagccgggccggtcgggctgtagc
agcagaggagggacgggggtctcggctcgcagcagcgggaaccagtcagcaaaacgcacg
tctcccgagcgaggacctgcacacccacgatctcctcacgtggctgctggtgcttgtctt
gtggacccgtgtgattccccagtgttgagtggaagaagaccaatggatgaagtcacggtc
tccacttcagaagacgctccaggtagaagggacctgaccggacagcacctagaggtggca
gctttgaagaaggcagagcctgacgacgacgacagtgacatggagggaaatgacctcttt
ttaacacaacacgatcctgaagatatggacttgtgttcccaagtgcagaacaatgacgat
aaactcatcgaagtggtccatggagaaaaccgagttcaggtagaagattccacacttcag
cctcagttggagtctttgagtagcacgaaatgtaagtcccagggctgtgccgaaactgtg
aaaacccagggcgactgctgctcgaaacactcggaagccaaagcggcagacgaagaagtg
tttcgcaaacctggcctgcctctttctgcatctaaacctttgaggccttccaccactaag
atttttagctcgagtagtacttcacgaactgctcatctttctaagtctttggaaagtagc
tcagcactcccagctctaaaaaataagtcaagtggaggacggtctgctttgaaagtaccg
cagccagcccctccggtgtctccgaagccagtgggagaagggaagggtttgtgcaacgtt
cgttcttctccggtccctccagtgtctccaaagccagtgggagaagggaagggtttgtgc
aacgttcgttcttctccggtccctccagtgtctccgaagccattgggtgaagtgaagggt
ttgtgcaacgttctttcaccgactccaagtaattccagcaggcaagtttacaaactccca
tttggtgaaagcaaacctctttcatcttctctggacagcacttcatcagagtccgtctct
gacaccttcgttaaagaggtcttaaaatggaagtatgagatgtttgtgaacttcgaccag
tgcgggctcccagcaagtctttgtcagaccatctcaagacctgtgcctgtcagatttcaa
gactgtagcgattattttaaagtttttctccctttgatggtagtgaatacttttgaaaca
gtagcacaggaatggatcagctctccaaataaagaaaaattctatgagttgcatttacga
aaatttcctgtagaatacaaaaaatactgggagtttgttgtttctcttgaggattgtgaa
ctagctaaacagcttcatccgaaggagaatgatttggtgtttctggtccctgaaagtcag
agtggagagaagagagatgtggaggggaaccccatccagggtccccgtgagtaccactgt
gcctacgtccataaattccgccgcacgtcagtcctgcgtaatgggaagtacgaatgtttc
ctttgcatccagactcaaggtgacttgccagtcaatctaagtgaatttgtaaaatgtgtt
gtaatcagttctctggtaaccacacaaaggaaactgaaagccatgatgttgctgagtggt
cggaaccagctggccagagctatcctgaacccaaaccccatggacttctgtacaaaagat
ttactggcgacaacatctgagagaatcactgcctacctaagagatttcaacgaagaacag
aagaaggcgatagaaaccgcctatgccatggtgaaacactccccggcagttgccaagatc
tgtctcattcacgggccgcccgggacagggaaatcgaagaccatcgttggcctcctgtac
cgcctgctgacagagaggagggggcgctttgacgaaaactcgaacgccaagatcaagcag
aaccgtgtgcttgtgtgtgcgccttccaatgcggccgtggacgagctcatgaaaaaaatt
atcgtcgaattcaaagaaaggtgtaaagacaagaagaatcctatgggaaactgtggcgat
atcaatttagtgcgtctggggccagaaaagtcgatcaataatgaggtcctgaaattcagt
ttggacaaccaagtcagccacagaatgaaaaaagatttaccatcttacgttcaggagatg
catagaagaaaggagtacctagaccatcagctagatgaactttcccgccagcgtgccctg
tgccgaggtgggagggaaatgcagaggcaagaattagatgaaagaattgctcacgtttcc
aaagaaaggcaggaacttgcttctaaaattaaagaggttcaagggcgcccacagaaaacc
cagagcatcatcatcctggagtcccacatcatctgttgcaccctgagcacgagcggcggc
ctgctgctcgagtctgcgttccgggggcaggggggcgtccccttcagctgtgtcatcgtc
gacgaggccgggcaggctggtgaggtcgagaccctcaccccactcatccaccgctgcaac
aagctgatcctcgtgggggacccgaagcagctcccccccacggttatctccctgaaggcg
caggagcacggctacgaccagtcgatgatggcccgcttctgcaagctgctggaggagaac
gtggagcacaacgtgagcggcaggttgcccatcctgcagctgagcgtccagtacaggatg
caccccgacatctgcctcttcccttccaattacgtgtacggcaggagcctgaagacccac
agaatgacagagaccatccggtgctcgtccgagtggccgtttcagccctacctggtgttc
gatgtcggagacggcttggagaggcgggacaacgactcttacgtgaatgttcaagaaata
aaagtggtcatagaattgatcaaacttcttaaagacaaaagaaaggacattacttaccgg
aatgttggcatcataacccattacaaggctcagaagatgatgattcagaaggagttggac
aaagaatttgaaggaaaggggctggcagaggtagataccgtggacgcatttcagggtcgt
cagaaagactgtatcattgttacgtgcgtcagagcgaacactgtgcaaggttcaattggg
tttctggcgagtttgcagagactgaatgtcgccatcacacgagccaagtacagcctcttc
atcctgggccacctgcggaccctgatggacaaccagcactggaaccacctgattcaggat
gcacagaggcgcggtgccatcatcaagacctgcgacaaaaactataaacacgacgcagcc
aagatcctgaaactgaagcccatgctgcagcgaagtctgacccaccccccttccctggcc
ctggagggcttcagcctccagggcggctcacccagcagcaggccagacagcgagattatc
aaggctttgtttgcatctttcctgtatgccacgcaccatgaccctaaggacgctgctgtt
actgttgctgccatggaccctgagaggcctccagtgaaggaccagctgcgggacccacga
ctgcgtagaaggatgggcttgagctccgaagcccaagggaaatgcctgagggacccagag
ccctcgagcccccagcaccagggagcaacgcctcccttgggcgagcccggcttccctgcg
agcccccaggtgctgggcagcaccgtggagtggtccacggccacagggagcatccacaga
ccgtatgtgccgtgtgaccctcctgctgccagcaccgctgccacagctccaagtgtgtat
gaccaggagtgggggcacagccaccaaagagacgccggggctttcaggaactgggaccag
gagatgcccagccctgtgagccatcaccccaagaggaactctggccgggacaggaggaga
ccggaggaggaggacagcagttcaaagaagagaaaactgtag
DBGET
integrated database retrieval system
