Artibeus jamaicensis (Jamaican fruit-eating bat): 119059247
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Entry
119059247 CDS
T07223
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03440
Homologous recombination
ajm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119059247 (PALB2)
03460 Fanconi anemia pathway
119059247 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajm03400
]
119059247 (PALB2)
DNA repair and recombination proteins [BR:
ajm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
119059247 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
119059247 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
119059247
NCBI-ProteinID:
XP_053527688
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MEEAPGKLLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNFIKKTVKEQDCLLQ
PEVSPQLNCSEPKTNVSSCDTLHINTHLDEETGDVEPESFKPRHGPVEGLNIQRTDDIQK
YFAYSINGPDGEKRQSKLPGRRKKQQKRIFISQERESFFDTGSLILSGKRLNKQKDINIE
NPETSVTKIRTKFLNPQSDIPDSQAPVAETNGGSILIPFHAKPQSSVDAVLGENNFPTVP
PHPLYTPSDSSSGPHLQHKSPEQNCELTAHGLKSISLMSPVNFEAHNKNMTVFTDNPEVN
KTVSASGQQPRSLDLEADNAFSVNEFTCNLPANENQNLKDQSHTEEFLESSSNALDNRNE
SLQENEVLNQSKSFGPEVVSLVSAKNQTHSCTMLEGLLFPAEYVRTTRQMSNCQRKVALE
AVIQSHFNVRKKGVKSKNKEATKILNLFSEETNRNITRMCDMCTGQTSSRSPFQTLLSLN
EVISPTGTTKDDFSRKVVTQPFNKRRRGKRKSICTPTSHHHELLLPTSGISGVNRSKEEV
TLHKEKNEKAIIHGKEGHCQKEDSFSSSNNVYSALGDDVCSAPSHKHEMLSLKQLSSILK
ITDFQLPDEEFGLLKLEKLKSYSEKPVEPFGTKVYRDRRLKEGKCIVLEELTPKQIDVEM
EDLREKLIVLPGKTHPKIPKLKSQPQQKGLSSSIVLFTPLNTITPDDDNRPTADVCSPAF
PIIGTTPDLGPQVHKVSVEVVRLTCSSPPLSHGKTSESQQCHSCTSPPKLDDILHVSGRK
GQPKCDCDSSPQATPLPTESFTVKEDQLCGNKCLEPWKHSIEQTEITDVPTCDTLNPGNL
QLVSKLKNPSGSCSVDVSAMWWEIAGVKEPCIITACEYAISLWKPLDIWQWEKMYSWHFT
EVPVLQIVPMPDVCNLVCVALGNLEIQEIRVLLWSSDAKSENQVLLSSGNIQAVLGLTKR
RLVSSSRTLCDQQVEIVTIAENGGSKEKQFLMPIEETIQTFAEVQGMQEALLGTTIMNNI
VIWNLKTGQLLKKIYIGDAYQASICHKAYSEMGLLFVVLSHPCAKEKEPSGSPVFQLIVI
NPKTALSMGVMLYCLPQGQAGRFLEGDVKDNFAAAVLTSGTIAIWDLLLGHCTALLPPVS
DQNWSFVKWSGTDSHLLAGQKDGSIFVYVIS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggctcccgggaaactcctcagctgcgaggagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagaccctagcccgccttcagcgtgcccaaaga
gctgagaaggttaagaattttattaagaaaacagtgaaagaacaagattgtttgcttcag
ccagaagtttcaccacagctaaactgttcagaacctaaaactaatgtatcttcttgtgac
acattacacatcaacacccatcttgatgaagaaactggagatgtggagcctgagtccttt
aaacctagacatggtccagtggaaggattaaacatacagagaacagatgatatccaaaaa
tattttgcctacagcatcaatggccctgatggtgagaaaaggcagagtaagctgccaggg
agaagaaagaagcagcagaagagaatatttatttcacaagagagagaatctttctttgac
actggttcacttatcctctctggaaaaagactaaacaaacaaaaagacatcaatattgaa
aatcctgagacatctgtaactaaaataagaactaagtttttgaatcctcagtctgacatt
ccagattctcaagcaccagttgcagaaactaatggagggagtatattaattccattccat
gccaagccacagagcagtgtggatgctgtcttaggagaaaataatttccctacggtgccc
ccacatcctttgtatactccctcagatagcagtagtggtccgcaccttcaacataaatct
cctgaacagaactgtgagcttactgctcatggtttaaaaagcattagccttatgtcacct
gtaaacttcgaggcacacaacaaaaacatgactgtcttcacagataacccagaggtaaat
aaaactgtaagtgcaagtggccagcagcctagaagtcttgatttagaagcagataatgca
ttttctgtaaatgaattcacttgtaacttaccagcaaatgaaaaccaaaacttaaaagac
cagagtcacacagaggagtttttagaatcttccagtaatgcccttgataatagaaatgaa
agtcttcaggaaaatgaggttctgaatcagtctaagagttttggtccagaagtagtctct
cttgtttctgcaaaaaatcaaacccattcttgcactatgctagaaggccttctttttcct
gcagaatatgttagaacaacacgacaaatgtcaaattgccagaggaaagtagccctggaa
gctgtaattcaaagtcacttcaatgtcagaaagaaaggggttaaaagtaaaaataaggaa
gctactaaaattctaaatcttttcagtgaagaaacaaacagaaatataactaggatgtgt
gacatgtgcacaggacaaacaagttcaagaagtccttttcagacacttctctcattaaat
gaagtcatttctcccactgggaccactaaagatgatttttcgaggaaggtggttacccag
ccattcaataaaagacgcagaggaaaaagaaagtcaatctgcacccctacatcacatcat
catgaactacttttgcccacttctggcatatcaggtgttaacaggtccaaggaagaagtc
accttgcacaaagaaaagaatgaaaaagcaattattcatgggaaagaaggtcactgccaa
aaagaggactccttttcttctagtaataatgtttattcagctttgggcgatgatgtttgc
agtgctccatctcataagcatgaaatgttaagtttaaagcaactgtcatccattctaaaa
atcacagactttcagttacctgatgaagaatttggacttcttaagcttgaaaaactgaag
tcctactcagaaaagccagttgagccttttggaacaaaagtatatagagataggcgtctt
aaagagggaaaatgtattgttttggaggaactgactcctaaacaaatcgacgtagaaatg
gaagacttgagagagaaactgattgttctaccaggaaaaacacatcctaaaataccaaag
ctaaaaagccagccgcagcagaagggcctttcctcatccatagtacttttcactccttta
aacactattactcctgatgatgataacagaccaacagcagatgtgtgttcacctgctttc
cccatcataggcactactccagatcttggcccccaggttcacaaagtgtctgtagaagtt
gttagattaacttgctcttcacccccgctttctcatgggaaaaccagtgagagtcaacaa
tgccacagttgcaccagcccaccaaaattagatgacatactccatgtgtcaggaaggaaa
ggacagcctaaatgtgactgtgattctagtccccaagcaacacctctccccactgagtca
ttcactgtcaaagaggatcagctctgtggaaataaatgcctggaaccatggaaacattcc
attgaacagactgaaataacagatgttcctacttgtgacaccttaaacccaggcaaccta
caattggtttcaaaattaaagaatccttcaggttcctgttctgtggatgtgagtgctatg
tggtgggaaatagctggtgtcaaagagccatgtatcataactgcttgtgaatatgcaatt
tctctctggaaacctctggatatttggcagtgggaaaaaatgtattcctggcacttcaca
gaggttccagtattacagatagttcccatgcctgatgtttgtaatctggtgtgcgtggct
ttgggaaatttggaaatccaggaaatcagggtattactttggtcctctgatgctaaaagt
gaaaatcaagtgcttctgagttctggaaatatacaagctgtgcttggactgacaaagagg
aggctagtcagtagcagcaggaccctttgtgatcaacaagtagagatcgtgacgattgca
gaaaatggagggagcaaagaaaaacagtttttgatgcctattgaggagactatacaaact
tttgctgaagttcaagggatgcaggaagctctgcttggtaccactataatgaacaacatt
gttatttggaacttaaaaactggtcagctcctgaaaaagatctacattggtgatgcctac
caagcttccatctgtcacaaagcctattctgaaatggggctcctttttgttgttctgagt
catccgtgtgccaaagagaaggagccatcaggaagccctgtgttccagcttattgtgatc
aaccccaagacagccctgagcatgggcgtgatgctctactgtcttcctcaagggcaggct
gggaggttcctggaaggtgatgtgaaggataatttcgcagcagcagtgttgacttctgga
acgattgccatttgggacttacttctaggtcattgcactgctcttcttccacctgtctct
gaccagaactggtcttttgttaaatggtcaggtacagattctcatttgctggctggacaa
aaagatggaagcatatttgtgtatgttataagttag
DBGET
integrated database retrieval system
