Artibeus jamaicensis (Jamaican fruit-eating bat): 119059773
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Entry
119059773 CDS
T07223
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm04613
Neutrophil extracellular trap formation
ajm05014
Amyotrophic lateral sclerosis
ajm05034
Alcoholism
ajm05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
119059773 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119059773 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119059773 (HDAC6)
09165 Substance dependence
05034 Alcoholism
119059773 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ajm01009
]
119059773 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajm03019
]
119059773 (HDAC6)
04131 Membrane trafficking [BR:
ajm04131
]
119059773 (HDAC6)
03036 Chromosome and associated proteins [BR:
ajm03036
]
119059773 (HDAC6)
Enzymes [BR:
ajm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119059773 (HDAC6)
Protein phosphatases and associated proteins [BR:
ajm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119059773 (HDAC6)
Messenger RNA biogenesis [BR:
ajm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119059773 (HDAC6)
Membrane trafficking [BR:
ajm04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119059773 (HDAC6)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119059773 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
119059773
NCBI-ProteinID:
XP_037015486
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MSALRPNRVRGEVSPTMTSTGQDSTTTKQRRSRQNPQSPPLDSSIVSVRPQTCSDEGEGE
QWAMQWTLTFLPIWQKPGVKGAGLRSSPKLAEVKKKGRMKKLSQAPEQDLIVGLQGLDLN
LEAKTLPGTGLVFDEQLNDFHCLWDDSFPEGPERLHAIKEQLIREGLLDRCVSFQARFAE
KEELMLVHSLEYIDLMETTQDMSEGELRVLADTYDSVYLHPNSYTCACLASGSVLRLVDA
VLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQVKHRIQRVLIVDWDVHHG
QGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVGMRDA
DYIAAFLRVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGR
LILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCASALSSLSCTLEALEPFWET
LMRSDGTLEGDHAEGSSVEEEEEGPWPPQALPILMWPVLQARTGLVYDQRMMDHYNLWDH
HHPEMPQRVSRIMCRLEELGLAGRCLILPARPATDAELLTCHSAEYVSRLRATEKMKTRE
LHRESSNFESIYICPSTFACAQLATGAACCLVEAVLAGEVLNGVAVVRPPGHHAEQDAAC
GFCFFNSVAVAARHAQAISGHALRVLIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGT
FFPMGDKGASSQVGRSAGTGFTVNVAWNGPRVGDSEYLAAWHRLVLPIAYEFNPELVLVS
AGFDAAWRDPLGGCQLSPEGYAHLTHLLMGLAGGRIILILEGGYNLTSISDSMAACTRTL
LGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRATKVEDKEGPFSSTSATKEAIQP
ASPGSTERLTAPEGSDLDAGTGKATPGPSVQESTPAQTNPETVVAQLTKDQSPEAATGGA
TLDQTTSEAATPDQTTSKAATPDQTTSEAATPDQTTSEAASGGATLDQTTSQKPVGGAEL
IQTTEASRANKQTPPTSPVQGATPQISYSPPVGNLRTSELGNKAQEAPEPQTAEEERSLG
ETAGGQGIDDSVQAVGDTDQATFYAVTPLLWCPHLVAVCPVPEGGLDVTQPCQECGTLQE
NWVCLSCYEVYCSRYVNAHMLQHHERSGHPLVLSYVDLSAWCYGCQAYVHHQALLDVKNI
AHQNKFGEDMPHSH
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcactgcgcccaaaccgcgtcaggggtgaagtctccccgaccatgacctccacc
ggccaggactccaccacaaccaagcagcgaagaagtaggcagaacccccaatcgcccccg
cttgactccagcatcgtctcggtgagaccccagacctgttctgatgagggggagggggag
caatgggccatgcagtggactctgacctttctccctatttggcagaagccaggtgttaag
ggtgccggactccgctccagccccaaactagcggaggtaaagaagaaaggcagaatgaag
aaactcagccaagcaccagagcaagacctaattgtggggcttcaagggctggatctgaat
cttgaggccaagacactgcctggtactggcttggtgttcgatgagcagctaaatgatttc
cactgcctctgggatgacagcttccctgaaggcccagaacggctccatgccatcaaggag
cagctaatccgggagggcctcctggaccgctgtgtgtcctttcaggcccgatttgccgaa
aaggaggagctgatgttggttcacagcctagaatacattgatctgatggagacgacccag
gacatgagtgagggagaactccgagtcctagcagacacctatgactcagtttatctgcat
ccgaactcatacacctgtgcctgcctggcttcaggctctgtcctcaggctggtggatgcg
gtcctgggggccgagatccggaatggcatggccatcatcagacctcctggacaccacgcc
cagcacagtcttatggatggatattgcatgttcaaccatgtggccgtggctgctcgctac
gctcaagtgaagcaccgcattcagagagtccttattgtggattgggatgtgcaccatggt
caaggaacacagttcacttttgaccaggaccccagtgtgctctatttttccatccatcgc
tatgagcagggtcggttctggccccacctgaaggcctctaattggtccaccataggtttt
ggccaaggccagggatataccatcaatgtgccttggaaccaggtggggatgcgagacgcc
gactatattgctgctttcctgcgagtcctgctgcccgtcgcccttgagttccagccccag
ctggtcctggtggccgctggatttgatgccctccaaggagaccccaagggcgagatggct
gccactccagcagggtttgcccagctaacccacctgctcatgggtctggcaggaggcagg
ctgatcctgtctctggagggtggctacaaccttcgctccctggctgagggcgtcagcgcc
tcactccacactcttctgggtgacccttgccccatgctggagtcccctggtgccccctgt
gcaagtgccctgtcatcattgtcctgtactctggaagccctggagcctttctgggagacg
cttatgagatcagatggcaccctggagggggaccatgcggaggggtccagcgtggaggag
gaagaggaaggaccatggccaccccaagctctcccaattctgatgtggccggtgttgcag
gctcgcacagggctggtctatgaccagcgaatgatggatcactataacttgtgggaccac
caccaccccgagatgccccagcgtgtctcccggatcatgtgtcgtctggaggagctgggc
cttgccgggcgctgtctcatcctgcctgcacgccctgccacagacgctgagctgctcacc
tgccacagtgctgagtatgtgagccgtctacgggccacagagaaaatgaaaacccgtgag
ctgcaccgcgagagctccaactttgagtccatctacatttgtcccagcacctttgcctgc
gcacagctggccactggtgccgcatgctgtcttgtggaggctgtgctggcgggagaggtc
ttgaatggtgttgctgtggtgcgtcctcccggccaccacgcagagcaggatgctgcttgt
ggtttctgctttttcaactctgtggctgtggctgctcgccatgcccaggccatcagtggg
cacgcactgcgggtcctgattgtggactgggatgtgcatcacggtaatggaactcagcac
atatttgaggaggaccccagcgtgctctacatttccctgcaccgctatgatcatggcacc
ttctttcccatgggggataagggcgccagcagccaggtgggccggtctgcgggcacgggc
tttaccgtcaatgtggcatggaatgggcctcgcgtgggtgactccgagtacctggctgct
tggcatcgtctggtgctccccattgcctatgagtttaacccggaactggtattggtctcg
gctggctttgatgccgcatggagagacccgctggggggctgccagctgtcacctgagggc
tatgcccacctcacccacctgctgatgggccttgccggtggccgcattatcctaatccta
gagggtggctataacctgacatccatttcggactccatggctgcctgtactcgcaccctc
cttggggacccgccacccctgctgaccctgtcacggcccccactatcaggggccctggcc
tctatcactgagaccatccaagtccatcgcagatactggcgcagcttgcgggccacaaag
gtcgaagacaaggaaggacccttcagttctacatcagccaccaaggaagcaatccaacca
gccagtcctggatcaacggagaggctgactgcgccagaagggtccgatctagatgcaggc
acggggaaggctaccccaggaccctctgtgcaagagtccactccagcccagactaaccca
gagacagttgtggcacagctcactaaggaccagtctccagaggcagccacagggggagcc
acgctggaccagaccacctcagaggcagccacaccagaccagaccacctcaaaggcagcc
acaccagaccagaccacctcagaggcagccacaccagaccagactacctcagaggcagcc
tcagggggagccacgctggaccagaccacctcacagaagcctgtgggaggagctgagctg
attcaaaccactgaagcctcacgtgctaacaagcagactcctccaacctcacctgtgcaa
ggagccacaccccagatatcctacagtccgccggttgggaatctcaggacctcggaacta
ggcaacaaggctcaggaggccccagagccccagactgcagaagaagagaggtcgctagga
gagacagctggaggtcagggcatagatgattcagtgcaggccgttggggacactgaccag
gctacattttatgctgtgacaccactgctctggtgtccccatttggtggcagtatgcccc
gtacctgaaggaggcctggatgtgacccaaccttgtcaggaatgtggaacactccaggag
aactgggtgtgtctgtcttgctacgaggtctactgcagccgttacgtcaatgcccatatg
ctccagcaccatgaaaggtcaggacacccgctggtcctcagctatgttgacctgtctgcc
tggtgttacggatgtcaggcctatgttcaccaccaggctctcctagatgtgaagaacatc
gcccaccagaacaagtttggggaagacatgccccactcacactaa
DBGET
integrated database retrieval system
