Artibeus jamaicensis (Jamaican fruit-eating bat): 119060960
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Entry
119060960 CDS
T07223
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajm03021
]
119060960 (SCAF4)
03041 Spliceosome [BR:
ajm03041
]
119060960 (SCAF4)
Transcription machinery [BR:
ajm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119060960 (SCAF4)
Spliceosome [BR:
ajm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
119060960 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119060960
NCBI-ProteinID:
XP_037017204
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGSSSAAPGADSVANNEGSPPPPVKVSSEPPLATANSVAPVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQALTAQLKTAPTPP
PEQKATAFDKKLLDRFDYDDEPEAVEESKKEDAAASAASTASAAAPAAPAAAALPTTAAP
AASPPQAPFGFPGDGLQQPAYPQHQSMDPFPPPMMALQQDPVHHQVPLPPNGQMPGFGLL
PTPAFPPLAQPAVPPAVPGQQPFPAPFQAPSEPLAQKAHQEMKVEQPCTPEVNKRHMSDS
RKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERR
QKGLPPIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMV
HRQDAHRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYVPWDKVKPEE
LESFCEGGVLDSDTLSPEWKGIPKKHENEVAQNGGAESSHAEPVSPVPNPLPVPVPPMPV
PAPITVPPPQVPPQQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNP
MHLPPGFLPPGPPPPITPPVSIPPPHTPPMSIPNPAIAGINEDTTKDLSIGNPIPTVVSG
ARANAESGDSAKMFGSAVPPAAPASLPAPPATQPVSLLGTQGVAPGPVIGLQAPSTGLLG
ARPGMIPLQRPPGLPPPHLQRFPLMPPRPVPPHMMHRGPPPGPGGFGVPPPHGMKGPFPP
HGPFVRPGGMPGLGGPGPGPGPDDRDGRQQQPQPQQPPPQQQPQQPPPAQQPPPAQQPQP
QPFRNENRQQFNSGRDQERFGRRSFGNRVENDRDRYGDRSDERESSGRERREWGRRSPDR
DRHRDLEDRSRRSGGHRDRERDSRDRESRREKEDSRGKEKPEGVGRAADPALSQAGAAEP
VSELATGESAATAVAAKPAAELPAEATSSAGPEKESGSAAEAR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggacatgaaacctccc
atctctagagccaagatgattctcatcacaaaagctgctatcaaagccattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgcaaaccggagtacaaagtc
ccagggctgtatgtgatcgactccatcgtgcgacagtcgcgtcatcagtttgggactgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccagtatttatat
ctttgtccatctgaagataagagtaaaatagtccgtgtgctgaacctgtggcagaaaaat
ggagtcttcaagattgaaatcatccagcctcttctggacatggcagcgggaagcagcagc
gctgcccccggagcagacagcgtcgccaacaacgagggttcaccccctcctccagttaaa
gtctcttcggaacccccactagccactgcaaactcggtagcacctgtccctcagctgccc
agctccgacgctttcgctgcggtggcccaactgttccagaccactcagggccagcagctt
cagcagatcctgcagactttccagcagcctccaaaaccacagtctcctgcccttgacaat
gctgtgatggcgcaggttcaggccctcacggcccagttaaagacagctcctacgcctccg
cccgagcagaaggccaccgcatttgacaagaagctgctcgatcgatttgattatgacgat
gagccagaagctgtggaggaatcgaagaaagaagacgctgccgcctctgctgccagcacc
gcctctgccgctgcccctgcggcacctgccgccgccgccctgcccaccactgctgcaccc
gctgcatctccgccacaggcaccttttgggtttcctggtgacggcctgcagcagccggcg
tacccccagcatcagagcatggacccgtttccgcccccgatgatggcgctgcagcaggac
cctgtgcaccaccaggtcccacttcctcctaatggacagatgccgggatttggcctgctt
cccacgcctgcgttcccgcctctggctcagccggcggtccccccagctgtccccgggcag
cagccgttcccggccccgttccaggcccccagtgagccgctggcgcagaaggctcatcag
gaaatgaaagtagaacagccttgtactccagaggttaataagcggcacatgtccgacagc
agaaagtcaagatccaggtcagcatccaggtcaccaaaaaggaggcgatctcgatctggt
tccagatcgcggaggtctcggcatcgccgctccaggtctcggtcccgagaccgacgccga
cactctccgagatctcggtcccaagaaagacgggatcgggaaaaggaaagagagcgccgc
cagaaaggccttcctccgatcaaatcagagactgcgagtgtttgcagcaccacactctgg
gtgggacagctggacaagaggaccactcagcaggacgtcgccagtctcttagaagagttt
ggtccaatcgaatcaattaatatgatccctcccagaggttgtgcctatattgttatggtt
cataggcaagacgcgcaccgcgccctgcagaagctgagccgcgggaactacaaagtgaac
cagaaatccataaagatcgcctgggccttaaacaaaggaataaaggcagactataagcag
tactgggatgtagaacttggcgttacctacgtcccgtgggacaaagtcaagcctgaagag
ctggagagtttctgtgaaggtggagtgctggacagcgacacgctcagcccagagtggaaa
ggaattcccaagaagcatgagaatgaagttgcccaaaacggaggggcggagagttcacac
gcggaacccgtgtcgcccgtccccaaccctttgcctgtgccggtccctccgatgccggtc
cctgcgcccataacggtgcctcctccacaggtgccaccgcagcagcccggccctcccgtg
gtcggcgctctacagccgccggccttcacgccgcccttggggattcctcctccgggcttc
ggtcctggcgttcctcctcctcctcctcctcctccgtttctgcgcccaggattcaacccg
atgcatttaccaccaggtttccttcctcccggacccccccctcctataactccaccggtg
tccatccctcctccgcacacgccgccgatgagcatccccaaccctgctatcgctggtata
aatgaagacaccacaaaagacttatctattggaaatcccattccaacagtggtgtctggg
gcgagagcgaacgccgagtctggggacagcgcgaaaatgttcggctctgccgtgccgccc
gccgcacccgcgagtctgcccgcccctcctgcaacccagcctgtgtcgcttctgggaacc
cagggagtggcccccggcccggtcatcggcctgcaggcgccgtccactgggctcctcggg
gcccggccgggcatgatcccgctgcagcgccccccgggcttgcccccgccgcacctgcag
cgcttccctctgatgccgccgaggcccgtgccgccgcacatgatgcaccggggcccgccc
cccggcccggggggcttcggggtgcccccgccccacggaatgaaaggccccttcccgccg
cacggccccttcgttaggcctggtgggatgccggggctggggggcccaggacctggccca
ggacctgacgacagagacgggaggcagcagcaaccacagccgcagcagccgccaccgcag
cagcagccgcaacagccgccaccagcgcagcagccgccgccggcacagcagccacagcca
caaccgtttagaaatgaaaacaggcagcagttcaattcaggtagagaccaagaaaggttt
ggacgaagatctttcggaaatagggtggaaaatgaccgggaccgctatggggaccggagt
gacgagagagagagcagcggccgtgagaggcgagagtggggacggaggagccccgaccgg
gacaggcacagagacttggaagacagaagcagacggtctggtgggcaccgagacagggag
agggattccagggatagagagtctcgcagggagaaggaggacagccggggcaaggagaag
ccggagggggtgggccgggccgccgaccccgccctcagccaagcgggcgccgcagagccg
gtctcagaactcgccacgggggagtctgcggccacagcggtggccgcgaaacctgctgcg
gagctgcccgccgaggctacctcgtccgccggccccgagaaggagtcgggctcggccgcg
gaggctcgctag
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integrated database retrieval system
