Acinetobacter junii: BVL33_02235
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Entry
BVL33_02235 CDS
T04674
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ajn
Acinetobacter junii
Pathway
ajn03410
Base excision repair
ajn03430
Mismatch repair
ajn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BVL33_02235
03430 Mismatch repair
BVL33_02235
03440 Homologous recombination
BVL33_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajn03400
]
BVL33_02235
DNA repair and recombination proteins [BR:
ajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BVL33_02235
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BVL33_02235
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BVL33_02235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
APU47428
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Position
462163..463863
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AA seq
566 aa
AA seq
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MTKIQILERPLLTRPEQFQGVPTFIAEILARRGVASEQELELKLKHLLAPNLKDLDRAVE
IIDQAIDRQLQIVIVGDYDADGATSTALMVLVLREMGARVEYLVPDRFKYGYGLTPKIAE
LAAQTYRPDLLITVDNGISSHAGVEVAQALGMQVIITDHHLTTKPTPSAEAVVNPNQLDC
DFSSKSLAGVGVAFYVLAKLASHRSQQNKSTSKVSQYLDLVALGTYADVASLDYNNRILI
DAGLKRIQQNQCRAGILALLDVAGRDASTLRAQDLGFVLGPRINAAGRMESMRIGIECLL
AEDMTTAYPLAQQLNQLNVERRQVETEMKQQALIALQNVQLETDQIPPAIVMYDEQWHQG
VIGIVAGRLKEQFHRPSLVFAPDEDGIHIKGSARSIDGIHIRDMIEHVAEQYPHLVTHFG
GHAAAAGLTLKKAHFNEFKQLFIQTIAEMDAELFHATIWTDGELPENALDLSTVDWIEQM
GPWGQKFPFPQFQGTFKVIDYRWLKDQHLKLKLSLGTQSIDAIAFNAVDRFEFNPMQSFV
DLVYTLERNVFNGNVSLQLQVVHLKQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaattcaaattttagaaagaccattactcacacgccctgaacagtttcagggc
gtgccaacgtttattgccgagattttggcacgacgtggtgttgcctcagagcaagaacta
gaactgaagcttaaacatctgcttgcacccaatctaaaagatttggatcgagctgtagaa
atcattgatcaagcaattgatcgtcaattacaaatcgtgattgtgggagattatgatgct
gatggtgcaaccagtacggctttgatggttctcgtacttcgagaaatgggagcaagagtt
gagtatcttgttcctgatcgatttaaatatggttatggtttaacacctaagattgcagag
ttagcagcccagacttatcgcccagatttattgattaccgttgataatggaatttcgagc
catgcaggtgttgaggtcgctcaagcacttgggatgcaggtgatcattacagatcatcac
ctgaccactaaaccaacaccgagtgcggaagctgtggttaatcctaatcagttggattgt
gacttttcgagtaagtcactggcgggggttggcgttgctttctatgtcttagcaaaattg
gcaagtcaccgtagtcagcaaaataaaagtactagcaaagtgtctcaatacttggatttg
gttgctttaggtacttatgcggatgttgcaagtttggattataacaatcgtattttgatt
gatgcaggtctaaaacgtattcagcaaaaccaatgtcgggcaggtattctcgcgctactt
gacgtcgcaggtcgagatgcttcaactttgcgagcacaagatttgggtttcgtcttagga
ccgagaatcaatgctgctggtcgtatggaaagtatgagaattgggatcgaatgcttactc
gcggaggatatgacaacagcttatccactggcacagcaactcaatcagttaaatgttgag
cgacgccaagttgaaactgaaatgaagcaacaagcattaattgctttgcaaaacgttcaa
cttgaaacagatcaaattccgcctgctatcgtgatgtatgacgaacagtggcatcaaggt
gtaattgggattgtcgctggacgtttaaaggagcagtttcatcgtccgagtttagttttt
gcccccgatgaagatggtattcatataaagggatctgcacgttccattgatgggattcat
atccgcgatatgattgaacatgtcgcagagcaatatccacatcttgtgactcattttggt
gggcatgcagcggcagcgggtttgacgctcaaaaaagcacattttaatgagttcaaacag
ttatttattcagacaattgctgaaatggatgctgaattgtttcatgcaacgatttggaca
gatggtgaattgcctgagaacgctttagatctatctacagtggattggattgaacaaatg
ggcccatggggacaaaaatttccatttccacaatttcaaggaacattcaaagtcattgat
tatcgctggttgaaagatcagcatctcaagttaaaactttcacttggtacacagtcgatt
gatgcaattgcatttaatgcggttgaccgttttgagtttaatccaatgcagagttttgtt
gatttggtttataccttggagcgtaatgtttttaatggaaatgtcagtctacaattacag
gttgtgcatttaaaacaataa
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