Acinetobacter junii: BVL33_02350
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Entry
BVL33_02350 CDS
T04674
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ajn
Acinetobacter junii
Pathway
ajn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BVL33_02350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajn03400
]
BVL33_02350
DNA repair and recombination proteins [BR:
ajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BVL33_02350
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BVL33_02350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
AAA_22
RsgA_GTPase
AAA_25
AAA_23
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND3
AAA_33
Viral_helicase1
NACHT
AAA_24
cobW
Motif
Other DBs
NCBI-ProteinID:
APU47448
LinkDB
All DBs
Position
complement(488377..491208)
Genome browser
AA seq
943 aa
AA seq
DB search
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
YCPEHDLPMVAQTVSEMVDAVKSLEEGTALMLLAPVVRERKGEYSNLFEQLQSQGFVRAR
VDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAILSWMN
GEHPERVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSADKLIPNPE
VSISQGAIRGWDRQRPYYYTMLQKVADHFDIPLDTPWNQLDKETQKKFLQGTGKEKIDLS
YIDERGRKHNRVQPFEGILPHLERRYRETESNYVRDDLAQYLSNAACDACGGSRLNEISR
HVRVKDKTIAEITKMSIGDAESYYQDLNLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGN
TVLVVEHDEDAIRAADHIIDIGPGAGIHGGAIIAEGTYDELANHADSLTGQYLSGKLKIA
VPKQRTQSPRPDEVIKLSGASGHNLRNVDLTIPLGIMTCVTGVSGSGKSTLINRTLLPLA
ATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEV
GYKGKNISDVLEMTVEDAAEFFSAIPVIHRRLETLTQVGLGYIRLGQAATTLSGGEAQRV
KLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHELRNKGNTIVVIEHNLDVIKTA
DWVIDLGPEGGSGGGQIIAEGTPEQVAEVEISHTGKFLKPMLK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtcatatccgtattcgaggcgcacgtacccataatttaaagaatgtgtca
ctcgatattccacgtgacaaatttgtggtgatcacagggctttcaggttcagggaaatca
tcgttggcatttgataccttatatgctgagggtcagcgccgttatgttgaatcactttcg
gcttatgcacgacaattcctttcgcaaatggaaaaacctgaagttgattcaatcgaaggt
ttatcccctgcgatcgcgatcgagcaaaaatcaacgagccataacccgcgttcaacagtt
ggaacaattaccgaaatttatgactatttacgactgctctatgcgcgtgtgggtacaccc
tattgtccagaacatgacttaccgatggtcgcacaaaccgtttcggaaatggtcgatgca
gtaaaatcgcttgaagaaggtacggcactgatgttgctcgcacctgtggtccgtgagcgc
aaaggcgaatacagtaacttatttgaacaattacaaagccaaggctttgtgcgtgcgcgt
gtcgatggcgaaattattgatattgataccccacctgaattagacaaaaagaaaaaacat
accatcgaagtcgtcgtcgaccgtttcaaagtccgcgatgatcttggcaatcgaattgct
gaatcctttgaaactgccttacgtttaggtggcgatattgcaattttatcgtggatgaat
ggcgaacacccagaacgtgtcttttcagcgaaacactcttgtcctgaatgtgaccgtgcg
gttgctgaactcgagcctcgtttgttctcatttaacaatccttttggtgcttgccctgtc
tgcgatggtttagggacgcgtagtcatttcagcgccgacaaacttattccaaacccagaa
gtatcgatcagccaaggtgcaattcgtggttgggacagacagcgtccgtattactatacg
atgcttcaaaaagtcgcagatcattttgatattccactcgataccccgtggaatcaactg
gataaagagacacaaaagaaattcttacaaggtacaggcaaagaaaaaatcgacctcagt
tatattgatgaacgtggtcgtaaacataatcgtgtgcaaccttttgaaggaatcttgcca
catttggaacgtcgctatcgtgaaacggaatcgaattatgtccgtgatgacttagcccaa
tacttatctaatgccgcttgtgatgcgtgtggtggttctcgtctcaatgaaatctcgcgt
catgttcgtgttaaagacaaaaccattgctgaaatcaccaagatgtcgattggtgatgca
gaaagttattatcaagacctcaatctcgagggtgctaaaggcgaaatcgccgataaaatt
tttaaagaaattcgtgaacgtttacactttttggtgagtgttggactcaattatttaagc
ttagcacgttcggctgaaaccctttcagggggtgaggcacaacgtattcgtctcgcttcg
caaatcggtgcaggcttgatgggtgtgatgtatgtgcttgatgaaccatcgattggtcta
caccaacgtgataatgatcgcttattacaaacgctcattcgtttacgtgatttgggcaac
accgtgctagttgttgagcatgatgaagatgcgattcgtgctgcggaccatatcattgat
atcggaccaggtgcagggattcacggtggtgcgatcattgctgaaggaacttatgacgaa
ttggcgaaccatgccgattcgcttacaggtcaatatctttcaggcaaattaaaaattgca
gtgcccaaacaacgtacccaatcaccacgtcctgatgaagtaattaagctttcaggcgca
agcggacataatcttagaaatgtcgatttgaccattcccttaggcattatgacctgtgtc
actggcgtttcaggttcaggaaaatcaaccttaattaaccgcactttattacctttagca
gccactcaactcaatggtgcaaccactcttaccgcagaaaagtttgattcaattgatggt
ttacaacacttggataaagtggtcgatattgaccaaagtccaattggtcgtacgccacgt
tcgaatcctgcaacttatacagggttatttaccccaattcgtgagttatttgcgcaaacc
cctgaagccaaagcacgtggttatagcgcaggtcgtttctcgtttaacgtaaaaggtggg
cgctgtgaggcatgtgaaggcgatggcatgatcaaggtcgcgatgcatttcctgcctgat
atgtatgtgccttgtgatgcctgtcatggcaagcgttataatcgtgaaacactggaagta
ggctataaaggtaagaatatttctgatgtgttagaaatgacggtagaagatgcagccgaa
ttctttagtgcaattcctgtgattcatcgtcgtctagaaacactgactcaagtaggactg
ggttatattcgtttgggacaggcagcaacaaccctttcaggtggtgaggcccaacgcgtg
aaattagcgcgtgagttagcaaaacgtgatacgggtaaaaccttatatatcctagatgag
ccaaccacaggtttacatttccatgatattgccaagttactcgacatcttgcatgagcta
cgtaataagggtaataccattgtggtgattgagcataatttggatgtgatcaaaactgcc
gattgggtgattgacctaggccctgaaggcggttctggtggtggtcaaattatcgctgaa
ggcacacctgagcaagttgctgaagttgagatttcacacacaggtaagttcttaaaaccg
atgttgaaataa
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