Acinetobacter junii: BVL33_15975
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Entry
BVL33_15975 CDS
T04674
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ajn
Acinetobacter junii
Pathway
ajn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ajn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BVL33_15975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajn03021
]
BVL33_15975
03400 DNA repair and recombination proteins [BR:
ajn03400
]
BVL33_15975
Enzymes [BR:
ajn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BVL33_15975
Transcription machinery [BR:
ajn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BVL33_15975
DNA repair and recombination proteins [BR:
ajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BVL33_15975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
APU49884
LinkDB
All DBs
Position
complement(3320994..3325187)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSEGHAPIEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLTDEEYYNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEIARLREEIPQTTSETKLKKASKRLKLMEAFKESNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGKVAIHARVKVRVHQTVINENGEREQQTIIVDTTPGRCLLWEVVPQGLSFDMINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKQVIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTSGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVC
ARCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGETVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVVVRQMLRKV
EITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHND
FSEVDQAFSQALNSDQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaacggattcagaaggtcatgcaccgatt
gaatttgaccgtatccgtattggtcttgcgtcaccagagatgattaagtcatggtctcac
ggtgaagttaaaaagcctgaaaccattaactaccgtacttttaaacctgaacgtgacggt
ttgttctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatataaaggcgtcatttgtgaaaaatgtggcgttgaagtaacgactgct
aaagttcgtcgtgaacgtatgggtcacattgaacttgcttctccagttgcacacatttgg
ttcttgaaatcattaccgagccgtattggtttacttcttgatatgacattacgtgatatc
gagcgcgtattatatttcgaatcttatgtcgttactgatcctggtatgactccgtttgaa
aagtatcaacttttaacggatgaagaatactacaatgcacttgaagagcacggtgatgaa
ttcacagcgaaaatgggtgcagaagctgttcaagacttgttgaaagacatcgatcttgaa
gctgaaattgctcgtttacgtgaagagattccacaaacgacttcagagacgaaacttaaa
aaagcgtctaaacgtttgaagttgatggaagcattcaaagaatcaaacaataagcctgaa
tggatggtgatgaatgtacttccagtacttccaccagacttacgcccgcttgtaccactt
gaaggtggtcgtttcgcgacttcagacttaaacgatctatatcgtcgtgtgatcaaccgt
aacaaccgtttgaaacgtcttcttgatcttgctgcaccagacattatcgtacgtaacgaa
aaacgtatgttacaagagtctgttgatgcattgcttgataacggtcgtcgtggtcgtgcg
attacaggttcgaacaaacgtccattgaaatctttggctgatatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttacttggtaaacgtgttgactattctggtcgttcggtaatt
accgtaggtcctactttacgtcttcaccaatgtggtcttccgaagaaaatggcgcttgaa
ttattcaaaccatttattttcgcgaaactacaagcatctggtcaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgtgagactccagaagtttgggacgttcttgcttctgta
attcgtcaacatccagtgatgttgaaccgtgcgccaacacttcaccgtttaggtcttcaa
gcatttgaaccgattctgattgaaggtaaggcgatccgtcttcacccactcgtatgtgct
gcgtttaacgccgacttcgatggtgaccaaatggcggtacatgttccattgacattggaa
gcgcagcttgaagctcgtgcattgatgatgtcaacaaacaacatcttgtcgccagccaac
ggtgagccaatcatcgttccttctcaggacgttgtattgggtctttactacatcacacgt
gatgcagtaaatgccaagggtgaaggcatggtgtttgcggatactcacgaagtaaaccgc
gcattggcaacgggtaaagtagcgattcacgcacgtgtaaaagtacgtgtacaccaaact
gtgattaatgaaaatggtgaacgtgaacagcaaacgatcatcgttgatacaactccaggt
cgttgcttactttgggaagttgttccacaaggtttaagctttgatatgatcaaccttgag
atgactaaaaagaacatctctaagttaatcaactcttgctaccgtaagcttggtttgaaa
gatactgttatcttcgctgaccaattgatgtatttgggcttccgtcaagcgacgcgctca
ggtgtatctgttggtatggaagacatgctgatcccaccaacgaaacaagtcattattgac
aaagctgaaacagaagttcgtgaaatcgaacaacagtttgagcaaggttttgtaactgcg
ggtgagcgctataacaaagtggtcgatatttgggcacgtaccaatgaccaggttgcgaaa
gcaatgatggataacttgtcttacacacttgttaaaaacaagcaaggtgaagacgagaag
cagaaatcattcaacagtatctacatgatgtctgactcgggtgcccgtggttcggcagct
cagattcgtcagttagcgggtatgcgtggtttgatggcgaagccagatggctcgatcatt
gagacaccgattaaagcaaacttccgtgaaggtttgacagtacttcagtacttcatttca
acacacggtgcgcgtaaaggtttggccgatactgcattgaaaactgcgaactctggttac
ttgactcgtcgtcttgtagacgtggcacaagacttagtaattactgagccagattgtggt
acaagtggtggtctagtgatgactccattcattcagggtggtgatgtcatcgagccatta
cgtgaccgcgtattaggtcgtgtaactgctgaagatgtacgtcgtgcatctgatgatgaa
gttgtattacctcgtggtacgttaattgacgagaaaatcgcagctcagcttgaagaagcg
ggtgtcgatgaagttaaagtacgctcagtaattgcatgtgaatctacattcggtgtgtgt
gctcgttgttatggtcgtgaccttgcacgtggtcacttggtgaatccaggtgaatcagtg
ggtgtaatggctgctcagtcaattggtgaacctggtacacagttaacgatgcgtacgttc
cacgtgggtggtgctgcgagccgaacttctgctgcgaacagcgttcaagtacgtaacaaa
ggtactgtacgtttccacaatgtgaaaactgtacaacatgccaaaggtcacttagtgtca
gtttctcgttcaggtgaaattggtattgcggatgacttaggtcgtgagcgcgagcgttat
aaacttccttacggtgccagcattttgttgaaagatggtgagactgtagaagctggcggt
atcgtagcgacttgggatccacatacacatccacttgttacagaagttgcgggtaaagca
cgtttcagccaaatcgctgatggtgtaactgcaacctctaagactgatgatgcaacaggt
atgacgactgttgaaatcttgccagtaacagcacgtcctgcgtctggtaaagatttacgt
cctgcgatcgtgttggatacaacagatggcggcgaacagttctacttcttgccacaaaat
acaatcgtgactgtccgtgatggcgaaacgattggtgtgggtgatgtaatcggtcgtgta
ccacaagaatcttcgcgtactcgtgatattaccggtggtcttccacgcgttgcagacttg
tttgaagcacgtaaaccaaaagagcatgcgattttggcagaagtgtctggtatcgtaagc
tttggtaaagagaccaaaggtaagaaccgtttagtgatcacaccagatgatggttcggag
atctacgaagagttgattcctaaatggcgtcaaatcaacgtgttcgagggtgagcatgtg
aaccgtggtgaaaccatttctgatggtccacaaaacccacatgacatcttacgtttgaaa
ggcgaagttgctttaacaaactacatcgtgaacgaagttcaagacgtttaccgtctccaa
ggtgtaaaaatcaacgataagcacattgaagtcgtcgtacgtcaaatgttgcgtaaagtt
gaaatcactgatggtggcgatacaagctttattaaaggcgaacaagtggattacatccgt
gttgttcaagagaaccaagctgtcttggctcagaacaagttccctgcgaagtttgaacgt
caattgatgggtattactaaagcgtcgctttctactgactcgttcatctctgctgcatcg
ttccaggaaacaacacgtgtgttaactgaagctgctgtaacaggtaaagaagatgattta
cgtggcttgaaagaaaacgttgttgttggtcgtttgattcctgctggtacaggtcttgcg
tatcacctagaacgtcgtcgtcaagaagcggaagctgctgagtttgaacttcacaatgat
ttcagtgaagttgatcaagcgtttagtcaagcgttaaattcagatcaattctaa
DBGET
integrated database retrieval system
