Acinetobacter johnsonii: RZ95_00885
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Entry
RZ95_00885 CDS
T04178
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ajo
Acinetobacter johnsonii
Pathway
ajo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RZ95_00885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajo03400
]
RZ95_00885
DNA repair and recombination proteins [BR:
ajo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RZ95_00885
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RZ95_00885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
BCA_ABC_TP_C
AAA_23
AAA_22
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
nSTAND3
AAA_33
NACHT
Viral_helicase1
cobW
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ALV71604
LinkDB
All DBs
Position
complement(193110..195941)
Genome browser
AA seq
943 aa
AA seq
DB search
MSQSHIRIRGARTHNLKNVNLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
FCPEHDLPMVAQTVSEMVDAVKGLDEGTALMLLAPVVRERKGEYSNLFEQLQSQGFVRAR
VDGEIVDLDPIPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN
GEHPDRVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPTCDGLGTRSHFSAEKLIPSPD
VSISQGAIRGWDRQRPYYYSMIEKVAAHFGFSLDTPWNELDADTKKKFLYGTGKEKVDLS
YIDERGRKHNRVQPFEGILPHLERRYRETESNYVRDDLAQYLSNAACDACGGSRLNEISR
HVRVKDKTIAQITKMSIGDAESYYQDLNLDGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LSRSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLETLVRLRDLGN
TVLVVEHDEDAIRAADHIIDIGPGAGIHGGHVIAEGTYDEILANSESLTGQYLSGKLKIE
VPKKRTEPPKPEEQIKLMGAAGHNLQNVDLTIPLGVMTCVTGVSGSGKSTLINRTLLPLA
ATQLNGATTLTAEKFDSIDGLQFLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYAAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDNCHGERYNRETLEV
GYKGKNISDVLNMTVEDAMHFFDAIPVIHRRLETLNQVGLGYIRLGQSATTLSGGEAQRV
KLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHELRNKGNTIVVIEHNLDVIKTA
DWLIDLGPEGGAGGGMIIAEGTPEHVAKNKVSHTAKFLKPMLK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtcatatccgtattcgaggcgcacgtacccataacttaaaaaatgtgaac
cttgatattccccgcgacaaattcgtggtgatcacgggactttctggttcaggtaagtca
tcgcttgcatttgatacgctgtacgccgaaggccagcgtcgttatgtcgaatcgctttcg
gcctatgcgcgccagttcttgtcacaaatggaaaaacctgaagttgactcaattgaaggt
ttaagccctgccattgcgattgaacagaagtcaaccagccataacccacgttctacggtg
ggaaccattaccgaaatttatgactatttacgtctactctacgcacgtgtcggcacgcca
ttttgcccagagcatgatttgccgatggtggcacagaccgtatcggaaatggtcgatgcc
gtaaaaggattggatgaagggacagcactgatgctgcttgcaccagtggtgcgtgagcgt
aaaggcgaatattccaacttgtttgaacaattacaaagtcaaggttttgtccgagcgcgc
gtcgatggtgaaattgttgatctcgacccaattccagaactcgataaaaagaaaaaacac
accattgaagtggtggtggatcgttttaaagttcgtgatgacctcggcaaccggattgca
gaatcttttgaaacggcactgcgcttaggtggtgatattgctgttttgtcttggatgaac
ggtgaacacccagatcgggtcttttcggctaaacactcgtgtcctgaatgtgaccgtgct
gtcgcagaattagaacctcgtctattctcattcaacaatccctttggtgcctgcccaacc
tgtgatggtttagggacccgtagccattttagtgctgaaaaactcattccaagtcctgat
gtatcgattagccaaggtgctattcgtggttgggatcgtcaacgtccgtattattacagc
atgattgaaaaagtggcagcgcattttggtttttctttggatacaccttggaatgaattg
gatgcggataccaaaaagaaatttttatacggtacaggcaaagaaaaagttgatttaagt
tatatcgacgaacgtggtcgtaagcataatcgtgtgcaaccttttgaaggaattttgcca
catttagaacgtcgctatcgtgaaactgagagtaactatgttcgtgatgatttagcacag
tacctgtctaatgcggcatgtgatgcctgcggcggatcacgtctaaatgaaatttcacgt
catgttcgagtaaaagacaaaaccattgcccaaattaccaaaatgtcgattggtgatgcg
gaaagttattatcaagatttaaatcttgatggtgcaaaaggtgaaattgccgataaaatc
tttaaagaaattcgtgagcgcctgcactttctagtctctgtgggtttgaattatttaagt
ctatctcgttcagcagaaacattgtctggtggtgaagcgcaacgtattcgtttggcttcg
caaatcggtgcaggtttgatgggtgtgatgtatgtcctcgatgaaccatcgattggtctg
catcaacgtgataatgatcgcctattggaaaccttagtccgcttacgtgatttggggaat
accgttttagtcgttgagcatgatgaagatgcgattcgtgcagcggatcatattatcgat
attggtcctggcgctggtattcatggcggtcatgtgattgctgaagggacttatgatgaa
atccttgcgaatagtgaatcacttacaggtcaatatttatcaggcaaactgaaaattgaa
gtaccgaaaaaacgtactgaaccaccaaagcctgaagaacaaattaaattgatgggtgct
gcgggtcataacctacagaatgtggatttaaccattcctttgggtgtgatgacctgtgtg
actggtgtatctggttcaggtaaatcaacgttgattaatcgtactttattgcctttagca
gcaacacagcttaatggtgcaaccactttaacggctgaaaaatttgattcaattgatggt
ctgcaattccttgataaagttgttgatattgaccaaagcccgattggccgtacacctcgt
tctaaccctgcaacgtatacgggtttgtttaccccaattcgtgaattgtttgcgcaaaca
cctgaagccaaagcacgtggttatgctgcgggacgtttctcttttaacgtgaaaggtggt
cgttgtgaagcctgtgaaggtgatggcatgatcaaagtggctatgcactttttacctgat
atgtatgtgccttgtgataattgtcatggtgaacgttataaccgtgaaacgttagaagtg
ggttataaaggtaagaatatttccgatgtactgaatatgacagttgaagatgcaatgcat
ttctttgatgcgattcctgtgattcatcgtcgtttagaaacactgaatcaagtgggcttg
ggctatattcgtttaggtcagtcagcaacgactctatcaggtggtgaagcgcaacgtgtg
aaattagcacgtgaattggcaaaacgtgatacaggtaaaacgttatatatcttggatgaa
cccactacaggtctacatttccatgacattgctaaactgttagatatccttcatgagcta
cgcaataagggcaatactattgtggtgattgagcataatttggatgtgatcaaaactgct
gactggttgattgatttgggccctgaaggtggtgcaggtggtgggatgattattgcggaa
ggaacgcctgaacacgtggcgaagaataaagtttcgcatactgcgaagtttttgaagccg
atgttgaagtag
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