Acinetobacter johnsonii: RZ95_03330
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Entry
RZ95_03330 CDS
T04178
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ajo
Acinetobacter johnsonii
Pathway
ajo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ajo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RZ95_03330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajo03400
]
RZ95_03330
Enzymes [BR:
ajo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RZ95_03330
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RZ95_03330
DNA repair and recombination proteins [BR:
ajo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RZ95_03330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ALV72025
LinkDB
All DBs
Position
complement(666864..667718)
Genome browser
AA seq
284 aa
AA seq
DB search
MPELPEVETTKASLAPLLDQQVLSVEVRQSSLRWPIPADLSKLVGQRLNQLKRRSKYILA
IFEQDTMLWHLGMSGSFRICEVGETLRKHDHLIIRFEDVELRYHDPRRFGCILWLDEYSQ
TKLIDTLGPEPLSADFNAEYLSQKLKSKQVGIKVAIMDNHVVVGVGNIYATESLFNLSIH
PAQVASSLTPSQIEKLVVEIKRILQQAIDLGGSTLRDYSNAMGENGYFQQTLLAYGRAGE
MCVNCETTLENIKLGQRASVFCPECQPLKKVQPKPKATARGKTK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacccgaagttgaaaccaccaaagccagtttagctccgttattagatcaa
caagtgctcagtgttgaagttcgccagtcgagcctgcgctggccgattcccgccgatctc
agcaaactggtgggtcagcgtttaaatcaactcaaacgccgttctaaatacattttggcc
atttttgaacaagacacgatgctttggcatttgggtatgtctggtagtttccgtatttgt
gaggtgggtgaaaccctgcgtaaacacgatcatttgattattcgttttgaagatgtcgag
ctacgctaccatgatccgcgccgcttcggctgtattttatggttggatgaatattcgcaa
accaagttaatcgatacccttgggcctgaaccactgagtgctgattttaacgctgaatat
ttaagccaaaagttaaaaagcaaacaggtcggcataaaagttgcaatcatggataaccat
gtggtggttggtgtcggaaatatctatgccacagagagtttgtttaatttgagcatacac
cctgcgcaagtggcgtctagtttaacacccagccaaattgaaaaattggtggtcgagatt
aaacgtattttgcagcaggccatcgatttaggtgggtctaccctgcgggactattccaac
gcaatgggtgaaaatggttactttcaacaaactttattggcttatggtcgagcaggtgaa
atgtgtgtgaactgcgagactacgcttgaaaacatcaaactgggacagcgtgcttctgtg
ttttgtcccgaatgccaaccgctgaaaaaagtgcaacctaagcccaaagccacagctcga
ggaaaaaccaaatga
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