Acinetobacter johnsonii: RZ95_10620
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Entry
RZ95_10620 CDS
T04178
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ajo
Acinetobacter johnsonii
Pathway
ajo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RZ95_10620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajo03400
]
RZ95_10620
DNA repair and recombination proteins [BR:
ajo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RZ95_10620
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RZ95_10620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
DACZ_N
AAA_5
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
ALV74494
LinkDB
All DBs
Position
complement(2158206..2160227)
Genome browser
AA seq
673 aa
AA seq
DB search
MSEKQPFDLVTNYQPAGDQPQAIEKLVAGIEKGYHDQLLLGVTGSGKTYTMANVIARTQR
PTIVMAHNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSAINDH
IDQMRLSATRSLLERRDAIIVASVSAIYGLGDPNAYMSMLLHIVQGDRIARDDIIRRLVE
MQYSRNELEFLRGTYRIRGEIIDIFPAESDQHAIRIELFDDEVDSIRWFDPLTGKLVRKV
PRITIYPKSHYVTPKDNLERAIGTIREELKERLGFFRAHDKLLEAQRIEQRTRYDLEMMQ
QLGYTNGIENYSRHLSGRPAGEAPPTLFDYVPDDALLIIDESHVTVPQIGAMYKGDRSRK
ENLVNYGFRLPSALDNRPMQFEEWERITPATIYVSATPAKYEIEKAEQIAEQVVRPTGLI
DPEIEVRPVLTQVDDVLSEINIRKDLDERVLVTTLTKRMAEDLSSYLKEYGVKVAYLHSD
IDTVERVKIIHDLRSGVYDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNVKGKAILYGDRITDSMQKAIDETARRREKQMAFNELHGIIPRSTIRQNKKDIDT
GEVLTDDQVESGITDQHQTLSADQQHLLSDPKLLAKHLSKLEKEMLKASKELQFEQAARL
RDEILRLKAQLLT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagaaacaaccttttgatttagtcaccaattaccaacccgcaggtgatcagccg
caagccatcgaaaagcttgttgctggaatagaaaagggctatcacgaccagttgttactt
ggggttacgggttcaggtaaaacctataccatggccaacgtgattgcgcggacgcaacgt
ccgaccattgtcatggcacataataaaaccttagccgcacagctttatggtgagttcaaa
tctttctttccgaacaatgccgtcgaatattttgtcagttattatgactattaccaaccc
gaagcctatgtgccatcttcagacacatttattgaaaaagattcagcgatcaatgaccac
attgaccaaatgcgtttatctgcaacacgttcgctcttagaacgtcgcgatgcaattatt
gttgcttcagtttctgctatttatggtttgggtgaccccaatgcctatatgagcatgctg
ctgcatattgtacagggcgatcgtattgcacgtgatgatatcattcgtcgtttggtggaa
atgcaatatagccgtaatgagcttgagtttttacgcggtacctatcgtattcgtggggaa
attattgatattttccctgcggaatcagaccagcatgcgattcgaatcgagttgtttgat
gatgaagtcgattcgattcgttggttcgatccactgacaggcaaactggtacgtaaagtt
ccgcgcataactatttacccaaaaagtcactatgtaacaccgaaagataatttagagcgc
gccatcggcacgattcgtgaagagttaaaagaacgcttaggtttctttcgtgcacatgac
aaattgcttgaagcacagcgaattgaacaacgtacccgttatgatttagaaatgatgcag
cagttgggctataccaacggtattgaaaactattcacgtcatttatccggtcgtcctgcg
ggcgaagcgccgccaaccttatttgattatgttcctgacgatgccttactaattattgat
gagtcacacgtgactgtgccgcaaattggcgcgatgtataaaggtgaccgttcgcgtaaa
gaaaacttggtgaattatggtttccgtcttcctagtgcgctagataaccgcccaatgcag
tttgaagaatgggagcggattacgccagcaacgatttatgtcagtgctacaccagccaaa
tacgagattgaaaaagccgagcaaatagctgagcaggtggttcgtcctacagggttgatt
gaccccgaaattgaagtacgtccggtattgactcaagttgatgatgtgttgtctgagatc
aatatccgtaaagatctagatgagcgtgttttggtaaccaccttaaccaaacgtatggca
gaagatttaagctcgtatttgaaagagtatggcgtcaaggttgcctatctgcactcagat
attgataccgttgaacgggtgaaaattattcatgacttacgttcgggtgtctacgatgtc
ctcgtcgggatcaacttactacgtgaaggcttggacatgcctgaagtgtctttagtggct
attttagatgcggacaaagagggtttcttgcgttctgagcgttctttgattcaaaccatt
ggtcgtgcagcgcgtaatgtaaaaggcaaagcgattttatatggtgatcggattaccgat
tcgatgcaaaaagccattgatgaaacagcccgtcgtcgtgaaaaacaaatggcctttaat
gagctgcatggcattattccgcgtagcactatcagacaaaataaaaaggatattgataca
ggcgaagtgctgacagatgatcaagttgaaagtggtatcacagatcaacaccaaacctta
agtgcagatcagcagcacttgctgtccgatccgaaacttcttgccaagcatttaagcaag
ttggaaaaagaaatgttaaaagcttctaaagagctacagtttgagcaagctgcacgtctg
cgagatgaaattttgcgcttaaaagcacaacttctaacctaa
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