Acinetobacter johnsonii: RZ95_18400
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Entry
RZ95_18400 CDS
T04178
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ajo
Acinetobacter johnsonii
Brite
KEGG Orthology (KO) [BR:
ajo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajo03032
]
RZ95_18400
03400 DNA repair and recombination proteins [BR:
ajo03400
]
RZ95_18400
Enzymes [BR:
ajo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RZ95_18400
DNA replication proteins [BR:
ajo03032
]
Prokaryotic type
DNA Topoisomerases
RZ95_18400
DNA repair and recombination proteins [BR:
ajo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RZ95_18400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ALV74803
LinkDB
All DBs
Position
pXBB1-9:265086..267749
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AA seq
887 aa
AA seq
DB search
MSSLFIVESPGKVEKIQHILDDLYPHEFVVRASVGHVCDLPNHEIGFSYPAFVPKYEISQ
NKTRVVQELRQAAKNADTVFLATDLDREGEAIAYHLKRILNLSDDQYIRVKYNAIDKSTI
ANALQNGEELDQGMVASQETRRFLDRMIGFYLYEPISNILKGKFPVGRVQSAVLVVLGDL
EDLLKNFKSHEHYNLEVTLKQGWAAKWDFSKWLNPEMKDVHNNQWLDKASITRLQNVIDK
KDLTITSVETKPSFRSAPAPFITVDLQAAAAARLGLDLKQTMEAAQKLYEGGYITYHRTD
AAVISPEGMQALEAFGEREGIAIIGNKAKSRDGAQEAHECIRPSDFFTFEAGEDQVQKDL
YRLIWLRTVASQMAPAEYEVKSVIGVYKDVTLNVDGESITKDAEFKASSRILKEDGWLGL
LKTYSIDENALEYVDGEEDSEKEPEHTLPIDIEVGQNHNVIAGKVIATKTKPRSRYTVPS
LVKLLEKKGIGRPSTYQSIFERLIKHGYIKLVKKKIEVTPHGLKLIQNIRGKFSFADPLY
TKEIEETLDLIATGDADYKQELQKFHLGIESELGQFSKHWLDSFPVYKCNNCDDGRMLPK
IGTNRDKTTSVYWSCNSCKSSAPNRNVDGKDEPGKPTVREPTAHLCLCGKSLTQVTTDKS
VFFECSQRAFVDGTCKETYRSTNDESGNLVPDFDEYRRNHTYKCQLEGCGGWLRELKGIS
TSSGKPYHFFSCEKSNPNLKGKKCKSGPLEVFPDGSPNYEPRFQVTKTEYPCICKKPLVH
TKYRKEPGVYEERYSCEAASCKRYFDILPDGSPDTQLTKSRTGNEAKCFECGQTMIQSAF
NLRGERKYKWDCFSCGASGYDNNGEPVQRGKKKAKSKSTSRKAKSSK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtttgttcatagtagagtcacccggaaaggtcgaaaaaattcaacatatcttg
gatgacctgtatccgcacgaattcgttgtacgcgcttcagttggccatgtatgtgattta
cctaatcatgagatcggtttttcatatccagcctttgttcctaaatacgaaatatctcaa
aataaaacacgcgttgttcaagaattaagacaggctgctaaaaatgcagatacggttttc
ctcgcaactgacttggaccgtgaaggtgaagccattgcatatcacttaaaacgtatcctg
aacttatctgacgatcagtatattcgcgtcaaatataacgctattgataaaagtacgatc
gctaatgcacttcaaaatggtgaagagctggatcaaggtatggtggcatctcaagaaaca
cgccgtttccttgaccgtatgattggtttttacttgtatgagccaatttcaaatatttta
aaaggcaaatttcctgttggccgtgttcaatctgccgtactcgttgtgcttggtgattta
gaagatctactgaaaaacttcaaatcacatgaacattacaatcttgaagtaactctaaaa
caaggttgggctgcgaaatgggatttttctaagtggcttaatcctgaaatgaaggatgtg
cacaataaccagtggttagataaagcttcaattacccgtctacaaaacgtaattgataaa
aaagacttaaccattaccagtgttgaaactaagccatctttccgtagtgctccagcgccg
tttattactgttgatctgcaagctgcagctgcagcgcgtcttggtttggatctaaaacaa
actatggaagcagcgcaaaagttatatgaaggtggttatatcacttaccatcgtactgat
gctgctgtaatttcgcctgaggggatgcaagctctagaagcttttggtgagagagagggc
attgcgattatcggcaataaagccaaatctcgcgatggtgctcaagaagcacatgaatgt
attcgtcctagtgacttctttacctttgaagctggtgaggaccaagttcaaaaggatcta
tatcgtctaatctggttgcgtactgttgcatcgcaaatggctccagctgaatacgaagtt
aaatccgttataggtgtctataaagatgtcactctcaatgtagatggtgaaagcattact
aaagatgctgaattcaaagcttctagccgtatcttaaaagaagatggctggttgggctta
ttaaagacctacagtattgatgaaaatgcacttgaatacgtggacggtgaagaagattca
gaaaaagaacctgaacatacgctacctatagatattgaagtcggtcaaaaccacaatgtt
attgctggtaaagttatcgcgaccaaaaccaaaccacgttcacgctacaccgtaccatca
ttggtcaaattacttgagaaaaaaggaattggtcgtcctagtacttaccaatcaatcttt
gaacggttaatcaagcacggctatatcaagcttgttaaaaagaaaattgaagttacaccg
catggattgaagttgattcaaaacattagaggtaagtttagttttgcagatccgctttac
accaaagaaattgaagaaacactggatctaatcgctactggtgatgccgattacaaacaa
gaactccaaaagttccatttagggattgaaagtgaattaggacagttctcaaaacattgg
cttgattcattccctgtctacaaatgtaataactgtgatgacggacgcatgttgccgaaa
atcggtaccaatcgcgacaaaacaacatcggtctactggtcatgtaattcatgcaaaagt
tcagcgccaaacagaaatgttgatggtaaagatgaaccgggtaagccaactgtacgtgag
ccaactgctcatttatgtttatgtggcaaatcactgactcaggttacaactgataaatct
gtattttttgagtgctctcaacgtgcgttcgtagatggcacctgtaaagaaacataccgt
tctacaaatgacgaaagcggtaacttggttcctgattttgacgaatatcgccgtaaccat
acatacaaatgtcagcttgaagggtgtggcggttggttgcgtgagttaaaaggtatttca
acttcttcaggtaagccgtatcacttcttttcttgtgaaaaatccaatccaaacctgaaa
ggcaaaaaatgtaagtcgggtccattagaggtgttccctgatggtagtcctaactacgag
ccaagattccaagtgaccaaaacagagtatccatgtatctgtaaaaagcctcttgtacat
accaagtaccgcaaagaacctggtgtttacgaagagcgatacagttgtgaagctgcatca
tgtaaacgttatttcgacatattgccagatggatcaccagatacccaacttacaaaatct
cgcactggcaacgaagccaagtgttttgagtgtggccagaccatgattcagtctgcattt
aatttacgtggtgaacgtaagtataaatgggattgctttagctgtggtgcaagtggatac
gacaacaacggtgagccagttcaacgtggcaaaaagaaagccaagtctaaatcgacctct
agaaaagctaaatcaagtaaataa
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