KEGG   Acinetobacter johnsonii: RZ95_19625
Entry
RZ95_19625        CDS       T04178                                 
Name
(GenBank) ABC transporter
  KO
K03701  excinuclease ABC subunit A
Organism
ajo  Acinetobacter johnsonii
Pathway
ajo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ajo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RZ95_19625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ajo03400]
    RZ95_19625
DNA repair and recombination proteins [BR:ajo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RZ95_19625
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RZ95_19625
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind SMC_N AAA_21 AAA_22 AAA_29 AAA_16 RsgA_GTPase AAA_13 nSTAND1 AAA DnaJ_CXXCXGXG nSTAND3 SLFN-g3_helicase AAA_33 AAA_7 AAA_25 AAA_23 SbcC_Walker_B APS_kinase DUF3388 CPT
Other DBs
NCBI-ProteinID: ALV75032
UniProt: A0A0U3JF36
LinkDB
Position
pXBB1-8:38271..40391
AA seq 706 aa
MKNGILLNGISTHNLKNIDIKIPLKKITVIYGRSGAGKSSLAFSSLYQLCHDEFDALERG
FSESSEYVIQCYEGLIPAVAISQKNTNNNPRSTLYSYLNIPQILSTIKVKSPVAIPNFDL
LKINKIGNECKYCLGLGEKVEFSEDYIVNQELGLNQKPFSCWRNGDLADYYNQLLLAYCE
QEQIDIYTPFKYLSDKDKQKVLYGSSNEKLQFRFKHRGKSKARKGIYKGVMLYIKENKNI
KAVDKYAKKVICSACNGARINIETHQTISIFNTTMPDFLLMPIDELVLMLKKEIKDDTVL
VKVLDSMCEMGLGYLNLARSIPSLSGGELQKLKFSKLLHSNISGVLIVIDEISSQINEND
FHKIWEKMKNIVKNNTLVLVEHAQFFIDHADYKIHIGYKAGIDGGKICPDEIIQPFFDIS
KRNRPQGFIEFIDLSKNNVIKQSVSIPRKCLTVFTGVSGSGKSSLAKAIFEQADVIYVSQ
KMANYSSRSILSSSIQINTLIAEYFSKMTGLDVSYFSPTQNGGCKQCQGIGVVKYERGYE
QDLYLTCPTCEGDLFDKFNENVLIQVHGKNIIDVYKIEISDLLTFFHDERIKNILDTLVS
LGLSHLQLQRKTQTLSGGELRRIKLCESLSKQRASKKILIIDEPTAGLDPETASKVASFI
YQKTKMFEAVILIEHRPEVIKYADYKVVMGVAAGINGGKILKQNLI
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgaaaaatggaattttattaaatggtatatcaactcataatttaaaaaatattgatata
aaaattccattaaaaaaaataaccgtgatatatggaaggtctggagcaggaaaaagctca
ttagctttttcttctctctaccaattatgtcatgatgaatttgatgctttagaacgtgga
ttttctgaaagtagtgagtatgttatccagtgttatgaagggctaatccctgctgttgca
atatctcaaaagaacacaaataataatccacgttctacactgtattcttatcttaatatt
cctcaaattttatctacaataaaagtaaaatcacctgttgctattccaaattttgactta
ttaaaaatcaataaaatcggcaatgaatgcaaatattgtcttgggttaggtgaaaaagtt
gaattttcggaagattatattgttaatcaagagttaggtcttaaccaaaaacctttttct
tgttggcgaaatggtgatttagcagactactataatcaattattgttagcatattgtgaa
caagaacaaatagatatttatactccattcaaatatttatcagataaagataaacaaaaa
gttctgtatggtagcagtaatgaaaaattacaatttagatttaaacatcgtggtaagtcc
aaagcaaggaaagggatttataaaggtgtaatgctctatataaaagaaaataaaaatata
aaagctgtagataaatatgcaaagaaagtcatttgttcagcctgtaatggagcgaggatt
aatatagaaactcatcaaactattagtatttttaatacgactatgccagattttttattg
atgcctattgatgaattagtgttgatgttaaaaaaagaaataaaagatgatactgttttg
gtaaaagtgttagattctatgtgtgaaatgggcttaggctaccttaatcttgcacgttca
attccaagtctatcaggtggtgaattacaaaaattaaaatttagtaaattattacattca
aatatatctggagtattgatcgtaattgatgaaatttcatctcaaattaatgaaaatgat
tttcataaaatttgggaaaagatgaaaaatattgtcaaaaataatacgttagttttagtt
gaacatgcacaattttttattgatcatgcagattataaaattcatattggttataaagca
gggattgatggaggaaaaatttgtcctgatgagattattcaaccattctttgatatttct
aaaaggaataggccacaaggtttcattgaatttatagatttaagtaaaaacaatgtaata
aagcaaagtgtaagtattcctagaaaatgtctcactgtttttacaggcgtatctggttcg
gggaaatcgtcattagcgaaagctatctttgaacaagcagatgtaatttatgttagccaa
aaaatggcaaattatagtagtcgctctattttgtcatctagtatacaaataaatacatta
attgcagaatatttttcaaaaatgactggattagatgtaagttatttttccccaacacaa
aatggcggttgtaaacaatgtcaaggtataggtgtagttaaatatgaaagaggatatgaa
caagatctatatttaacatgtcctacatgtgagggtgacttatttgataaattcaatgaa
aatgttttaatacaagtgcatggaaagaatattattgatgtttataaaatagaaataagt
gatttattgacattttttcatgatgaacgtattaaaaatatacttgatacacttgtatct
ttaggcttatctcatcttcagttgcaaaggaaaacacaaacactttcaggtggggaatta
cgccgcataaagctttgtgaaagtttatcaaaacaaagagcaagtaaaaaaattttaatt
attgatgaacccactgcaggactggaccctgaaacagctagtaaagttgcaagttttatt
tatcaaaaaactaagatgtttgaggcagttattctcattgaacatagaccagaggttata
aaatatgcagattataaggttgttatgggtgttgcggcaggaataaatggaggaaaaatt
ttaaaacaaaatttgatatag

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