Amphritea japonica: AMJAP_0144
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Entry
AMJAP_0144 CDS
T06992
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ajp
Amphritea japonica
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajp03021
]
AMJAP_0144 (rpoH)
Transcription machinery [BR:
ajp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMJAP_0144 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
BBB24743
UniProt:
A0A7R6P8D4
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All DBs
Position
168108..168965
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AA seq
285 aa
AA seq
DB search
MGKSLQVVEVLSPGQNLEAYIRQVTSIPVLTVEEERALAERLYYQNDLEAARQLVLSHMR
FVVHVAKSYSGYGLSQADLIQEGNVGMMKAVKRFDPTMGVRLVSFAVHWIKAEMHEFILR
NWRIVKVATTKAQRKLFFNLRSKKKNLGWLTNAEVTAMAEDLGVGEQVVREMEGRMSSAD
MAFDAPVGDDDERAYQSPAYFLEDHSQDPASQLEDANWEADSNQRLSAAMELLDERSRDI
LMQRWLGEEKATLHQLAARYEVSAERIRQLEKNAMKKIKASMLEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagagcctgcaagtcgttgaagtattatctccgggccagaacctggaggcatac
atacgtcaggtgacatctattcctgtacttacggtagaggaagagcgtgcactggcagag
cggctgtattaccaaaatgatcttgaagctgcccggcagctggttttatcgcatatgcgg
tttgttgtgcatgtagcgaaatcctattctggttatggactgtctcaggcagatctgatc
caggaaggtaacgtgggtatgatgaaagcggttaaacgctttgatccaaccatgggtgtt
cgcctggtatcttttgcagtgcactggattaaggcagagatgcacgagtttattctgcgc
aactggcgtatcgttaaagttgcgaccaccaaagcacagcgtaagttgttctttaatctg
cgtagcaagaagaaaaatctgggatggctgaccaacgctgaggttaccgctatggcggaa
gatctgggtgttggcgaacaagtggtccgggagatggaaggtcggatgagcagcgctgat
atggccttcgatgcaccggtaggcgatgatgatgagcgcgcatatcagtcaccggcttat
tttcttgaagatcacagccaggatcctgccagtcagctggaagatgcaaactgggaagcc
gactccaatcagcgtctgagtgctgcgatggaactgttagatgagcgtagccgggatatc
ctgatgcaacgctggctgggtgaagaaaaagcaaccctgcatcaattagcagcccgctat
gaagtctctgctgagcgaattcgtcagttagaaaagaacgcaatgaagaaaattaaggcg
tccatgctggaagcctga
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