Amphritea japonica: AMJAP_0436
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Entry
AMJAP_0436 CDS
T06992
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ajp
Amphritea japonica
Pathway
ajp03030
DNA replication
ajp03430
Mismatch repair
ajp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMJAP_0436 (holA)
03430 Mismatch repair
AMJAP_0436 (holA)
03440 Homologous recombination
AMJAP_0436 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajp03032
]
AMJAP_0436 (holA)
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_0436 (holA)
Enzymes [BR:
ajp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMJAP_0436 (holA)
DNA replication proteins [BR:
ajp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMJAP_0436 (holA)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMJAP_0436 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
HP_1247_M
WHD_BREX_BrxC
Gemini_AL2
Hda_lid
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
BBB25035
UniProt:
A0A7R6SRQ8
LinkDB
All DBs
Position
complement(474565..475584)
Genome browser
AA seq
339 aa
AA seq
DB search
MKIKPEQLASKLSQQPAPVYMVTGDETLLIEESCDLLRQHLNSVGFTERETLYTESGFKW
EYLLECANALSLFAEQKIIELRLGGSKPNKQASEILRQYLERPAEDNVLLIIANKLDANA
KKSAWFKAIDQQGIIVEIWPVELQQLPGWINQRARQIGLNLENDAVQLLCERIEGNLLAA
KQELDKLNLLYAGQSISADMVMDSVSDSSRYDIYGLTEAAIQQQVSRCNKIIEVLRQEGT
EATVALWAISREIRSLIAVQEGLQKGTPFDTICQRERVWGKRKNWLRSAAQRLHPDSLKQ
MLSRCTEADSQIKGAVGDPWLTLTGITLQMAGVELNLER
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaaaccagagcagcttgccagcaaactcagccagcaaccggctccggtttat
atggtaaccggtgacgaaaccctgctaatagaggaaagctgcgacctactacgccagcat
ctcaactccgtaggcttcaccgaacgggaaaccctctacacagaatcggggtttaagtgg
gaatacctgcttgagtgcgcaaacgccctctctctcttcgccgaacaaaaaatcatcgaa
cttcgcttaggcggtagcaagcctaataaacaagccagcgaaatcctcaggcaatacctg
gaacgtcctgcagaagataacgtactcctgattatcgctaataagctcgacgccaatgct
aaaaaaagcgcctggttcaaagcgattgaccaacagggcattatcgtcgagatctggcca
gtagaactgcagcagctccccggttggataaatcagcgagcgcgccagattggtcttaac
cttgaaaacgatgctgtgcagttactctgtgagcgaatcgaaggcaatctgctggccgct
aagcaggagctggacaagctcaatctgctctacgcaggtcaaagcatctccgctgatatg
gtaatggatagtgtgtctgacagttcacgttatgatatctatggcctgaccgaggcagct
attcaacaacaggttagccgctgcaataagatcattgaagtactgcgccaagaaggcact
gaagcgaccgtagcactttgggcaatcagccgtgaaattcgttccctgattgccgttcag
gagggcttacagaaaggcactcctttcgacacgatctgtcagcgagagcgagtctggggc
aaacgtaaaaactggctgcgctcagctgcccagcgactccatcctgatagccttaaacag
atgctaagccgatgtactgaagcggactctcagatcaaaggagcagttggcgacccctgg
ttaaccctcaccggtatcacccttcaaatggccggtgtagagctgaatttagaacgctga
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