Amphritea japonica: AMJAP_0588
Help
Entry
AMJAP_0588 CDS
T06992
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ajp
Amphritea japonica
Pathway
ajp02020
Two-component system
ajp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AMJAP_0588 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AMJAP_0588 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajp03021
]
AMJAP_0588 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ajp02035
]
AMJAP_0588 (fliA)
Transcription machinery [BR:
ajp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMJAP_0588 (fliA)
Bacterial motility proteins [BR:
ajp02035
]
Flagellar system
Flagellar assembly proteins
Stator
AMJAP_0588 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Phage_terminase
HTH_28
GerE
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BBB25187
UniProt:
A0A7R6SS36
LinkDB
All DBs
Position
663446..664156
Genome browser
AA seq
236 aa
AA seq
DB search
MYNQLQFRSSQEIIEQHGTLVKRIAHHLLARLPNTVVLEDLIQAGMVGLLEAAKKYDASK
GASFETYAGIRIRGSIIDEVRRGDWTPRSVHRNGRRVAEAVQVIETRTGRDAQDGEVAAE
LNISVTEYHALLKDSAESRLFSFDKLTSPQDDGPGEYIAGSEPDPSEQFEQEDFVKAIAQ
EIKGLPEREKLVLSLYYDQELNLKEIGKVLGVSESRVSQIHSQAALRLRSRLKEWR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtataatcagcttcagtttcgctcaagtcaggaaataattgagcagcatggtactttg
gtaaagcgaattgcccatcacttgttggcgcgattaccgaatactgttgtgctggaagac
ttgattcaggcaggtatggtgggtttgttagaagcggcaaaaaaatatgatgccagcaaa
ggggctagttttgaaacgtatgcgggtatccgtattcgtggttctatcatcgatgaagtg
cgtaggggggactggacaccgcgttcggtgcaccgaaatggtcgccgggtggctgaagcg
gttcaggtaattgagacgcgcaccgggcgggatgcccaagatggggaggttgctgctgaa
cttaatatcagtgtgactgaatatcatgcattattaaaagattcagcagagagtcggcta
tttagttttgataagctcaccagtcctcaggatgacgggccgggagaatatattgccggt
agtgaacctgatccttctgaacagtttgaacaggaagattttgttaaagcgatcgcccag
gaaattaaaggcttaccggaaagagaaaaactggtgttatctctgtattacgatcaggag
ctcaacctgaaagagattggcaaagtgctcggtgttagtgagtcaagggtgagtcagata
catagtcaagctgcgctgcgtttacgtagtcgtttaaaagagtggcggtaa
DBGET
integrated database retrieval system
