Amphritea japonica: AMJAP_1168
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Entry
AMJAP_1168 CDS
T06992
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ajp
Amphritea japonica
Pathway
ajp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMJAP_1168 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_1168 (uvrB)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMJAP_1168 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMJAP_1168 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_33
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBB25763
UniProt:
A0A7R6PAA1
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All DBs
Position
1331944..1333956
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AA seq
670 aa
AA seq
DB search
MKQRFQVQSKFQPAGDQPAAIDGLVKGIHAGLASQTLLGVTGSGKTFTIANVVAELQRPT
IVLAHNKTLAAQLYGEFRDFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIDKDASINEHIE
QMRLSATKALLEREDAIIVATVSSIYGLGDPQAYLGMMLHLDRGDQADQRAILRRLAELQ
YTRNDVELHRATYRVRGDVIDVFPAESEKEAVRIEIFDDEIENLSYFDPLTGEVLRRVPR
ATIYPKSHYVTPRETLVAAVDKIKDELHARLKQLRDHDKLVEAQRLEQRTLYDIEMIMEL
GYCSGIENYSRYLSGRDPGNAPPTLFDYLPDDALVVIDESHVTIPQLGAMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWEIQAPQMVFVSATPGKYEAAQAGQVVEQLVRPTGLLDP
IVEVRPAKTQVDDLLGEINLVAGRGERVVVTVLTKRMAEDLTDYLAEHGVRVRYLHSDID
TVERVEIIRDLRIGEFDVLVGINLLREGIDMPEVGLVTILDADKEGFLRSETSMIQTIGR
AARNINGRAILYADRITGSMQRAMDETERRREAQILHNEKHGIVPVGIKKSVADIMEGAS
AIPGRKTKTGRKVAEPAAEYEIDPRKLSSAELAKTMSRLEDKMYEAAKNLEFEKAGHYRD
QLEKLKHSGL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcgttttcaggttcagtctaagtttcagcctgcgggtgaccagccagccgct
atcgatggtttggttaagggaattcatgccggtttggcgtctcaaaccctgcttggggta
accggatcgggtaaaacctttacgattgctaatgtggttgctgaattgcagcgcccgacc
attgtactggcgcataacaaaacgctggctgcgcaattatatggtgaatttcgcgatttt
ttccccaataacgcggtggagtatttcgtatcttattacgactattatcagcctgaagct
tatgttccttcatcagatactttcatcgataaagatgcttcgatcaatgaacatattgaa
cagatgcgactgtcggcgactaaggcgttgttggagcgcgaagatgcgattatagtcgcc
actgtttcgtcgatctatggactgggtgatcctcaggcctatcttgggatgatgctacac
ctggatcggggtgatcaggcagatcaacgtgcgattctgcgtcggttggctgaactgcag
tacactcgcaacgatgttgagttgcatcgggccacttatcgagtgcgtggtgatgtgatt
gatgtttttcctgcagagtctgaaaaagaagcagtgcggattgagatctttgacgacgaa
attgaaaacctgagttattttgatcctttgaccggagaggttctgcgccgggtgcccaga
gcgactatctatccgaaatcacattacgttacgccgagagaaaccttggtagcggcagtg
gataagattaaggatgagctgcatgcccgcctcaaacagctacgggaccatgacaagtta
gttgaggctcagcgtttggaacagcgaacgttgtatgatattgagatgattatggagctg
ggatattgctctggaatcgagaattactcccgctatttgtccggacgggatccgggcaac
gcgccaccaacactgtttgattatctgccggatgatgccttggtggtcattgatgaatcc
catgtcactattcctcagttaggtgcgatgtataaaggtgaccgttcgcgtaaagaaacc
ttggtggaatatggttttcgtctgccttcggcgctggataatcggccgatgaagtttgaa
gagtgggagattcaggcgccgcaaatggtttttgtttcggcaacgcctgggaaatatgaa
gccgctcaggcgggacaggttgttgaacagttagtccggccaaccggcttgcttgatcct
attgtcgaagtgcgcccggccaaaacccaggttgatgacctgctcggcgagataaacctg
gttgctggccggggagagcgggtggttgtaactgtactgaccaagcgtatggctgaagat
ctgactgattacttagcagaacatggagtacgggtgcgttacctgcactctgatattgat
accgtagaacgggtcgaaattattcgtgacctgcgcattggtgagttcgatgtattagtc
ggtattaacctgttgcgggaaggtatcgatatgccggaagttggcctggttactattctg
gatgccgacaaagagggcttcctgcgttcagaaacttcaatgattcaaacgattggccgg
gcggcacgaaatattaatggtcgggctattctctatgctgaccgtattaccggctcgatg
caaagggcgatggacgaaaccgagcgtcgccgagaggcacagattttacataacgagaag
cacggtattgtgcctgttggtattaaaaaatcggttgccgatattatggaaggtgcatcg
gcgattccagggcggaaaactaaaactggtcgtaaagtggcagagcctgctgctgaatat
gagattgatcctcgtaaactgagttcagctgaactggctaagacgatgagtcgtctggaa
gataagatgtatgaagcggcgaagaatcttgagtttgagaaggcgggtcattatcgggat
cagttggaaaaacttaaacacagcggcctatga
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