Amphritea japonica: AMJAP_1830
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Entry
AMJAP_1830 CDS
T06992
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ajp
Amphritea japonica
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajp03032
]
AMJAP_1830 (topA)
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_1830 (topA)
Enzymes [BR:
ajp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMJAP_1830 (topA)
DNA replication proteins [BR:
ajp03032
]
Prokaryotic type
DNA Topoisomerases
AMJAP_1830 (topA)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMJAP_1830 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
BBB26421
UniProt:
A0A7R6PCC5
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Position
complement(2054953..2057610)
Genome browser
AA seq
885 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQFVVKSSVGHIRDLPTSGSGNATASDPKERARQAAIT
RKLAPDEKIKHKAAKAKTQLIARMGVNPEQDWDARYEILPGKEKVVDELRRLAKDADTIY
LATDLDREGEAIAWHLREAIGGDDDRYRRVVFNEITKKAIQEAFEQPSELDLNRVNAQQA
RRFLDRVVGYMVSPLLWAKVARGLSAGRVQSVAVRLLVDREKEIRSFIPEEFWEMHADVL
SSKQESLRLQVDKYQDKGFRPESGVETEAHLEQLKQQEFKVTNRQDRPTSSRPSAPFITS
TLQQAASTRLSFGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVNNCRDYISDNFGSKY
LPEKPNSYSSKEGAQEAHEAIRPSDVSIEATSLKGMERDAERLYELIRRQFVACQMTPAL
YTSTRVTVTAGDFELRTKGRILRFDGYTKVFNSRGKDEDVILPDVQPGDVLQVQKLDPKQ
HFTKPAPRFTEASLVKELEKKGIGRPSTYASIISTIQDRGYVEVQNRRFYAQKMGDIVTE
RLVENFTDLMDFGFTARMEESLDDIATGSADWKELLNQFYQGFSNRLEQAQHAETGMRLN
EPTETDIPCPSCERKMMIRTGTTGVFLGCSGYSLPPKERCKSTMNLVHGDEVVSVDGDEE
EESRILRNKHRCKICDTAMDSYLIDEQRKLHICGNNPDCAGFEVEQGSFKIKGYDGPVLD
CDKCGAEMQLKTGRFGKFFGCTSETCKNTRKLLRSGEAAPPKMDPVPMPELACDNVEDTF
ILRDGASGLFLAASQFPRKRETRAPKVAELLPHKGEIDPKYKFLFSAPVADDEGNPTVVR
YSRKTKEQYVMTEVNGKATGWRAFYTGGSWSIEAAKAKKKATKKK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatccctagttattgtagagtcacctgctaaagcaaaaaccataaacaagtat
ttaggtaatcagtttgtggtgaaatcaagtgtggggcacatccgtgaccttcccaccagt
ggctctggcaatgcaaccgcatcagaccctaaagagcgtgctcgtcaggcagccataacc
cgtaaattggcgccggatgagaagattaagcataaggccgcaaaagcgaagacgcagctg
attgcccggatgggggttaacccagagcaggactgggatgcccgctatgaaatcttgccg
ggtaaagaaaaagtcgttgatgaacttagacgattagctaaagatgccgatactatctat
ctcgcaaccgatttggaccgcgaaggggaagccattgcctggcacctgcgggaagcgatt
ggtggtgacgatgatcgatatcgccgggttgtctttaatgagataacgaaaaaagcgata
caggaagcttttgagcagccaagcgagctagaccttaatcgggtaaatgctcagcaggca
aggcgctttcttgatcgtgtcgttggttatatggtctcgccattactgtgggccaaggtt
gcacgtggactatccgctggccgggtacaatctgttgccgtgcgactactggttgatcgg
gaaaaagagattcgtagctttattccggaagagttttgggagatgcatgccgatgtactt
tcgagtaagcaggaatcgctgcgacttcaggttgataaataccaggataaaggtttcagg
ccagagagcggtgtagaaacagaggctcatcttgaacaactgaaacaacaagagtttaag
gtaacaaatcgccaggatcgacctactagcagccggccgtcggcgccgtttattacatca
acgcttcagcaagctgcgagtacgcgactcagttttggtgttaagaaaacgatgatgctg
gctcagaggctctatgaagcgggttatatcacgtatatgcgaaccgactcgaccaacctc
agtgcggaagcggttaataattgtcgtgactacatcagcgacaattttggttccaagtat
ctgcctgaaaagcctaattcctatagcagcaaagagggcgctcaggaggctcatgaagcg
atccggccctcagacgtgtcaatagaggcgacatctctaaaagggatggagcgggacgct
gagcgcttgtatgagttgattcgtcgtcagtttgttgcttgtcaaatgacgccggcgctt
tataccagtacgcgggtcaccgttaccgcaggcgatttcgagttacgcacgaaagggcgt
attttgcgctttgacggttacactaaggtgtttaacagtcgcggtaaggatgaagatgtc
attctgccggatgtgcagcctggagatgtattacaggttcaaaagctggatcctaaacag
cactttacgaaacctgctcctcgtttcactgaggccagtctggttaaagagctggagaaa
aaaggtataggtcgaccctctacttatgcgtcgatcatctcaacaattcaggatcgaggc
tacgtagaggttcaaaatcgtcgtttctatgctcagaaaatgggtgatattgttactgag
cgactggtcgagaattttacggatctgatggattttggctttactgccagaatggaagaa
tcgctggatgatatcgcaacgggtagtgctgattggaaagagttgttgaatcagttctac
cagggcttcagcaatcgtttggagcaggcgcagcatgcggaaacgggaatgcgcctgaac
gaaccaaccgaaacggacattccttgcccgagttgtgagcgtaagatgatgattcgtacc
ggtactacaggtgttttcctgggatgttccggatactcgctaccacccaaagaacgctgt
aaaagcacgatgaatcttgtgcacggcgatgaagtggtcagtgttgatggagatgaagaa
gaagagtcgcggattctgcgtaataaacatcgttgtaagatctgtgataccgcgatggat
agttatcttatcgatgagcagcgtaagttgcatatctgcggtaataatcctgactgtgcc
ggttttgaggtagagcagggtagctttaagattaaaggctatgatggcccagtgcttgac
tgcgataagtgtggcgctgagatgcaacttaaaaccggtcggtttggcaagttctttggt
tgcacaagtgagacctgtaaaaatactcgtaagttattgcgaagtggagaagcagcgccg
ccgaaaatggatcctgtacctatgcctgaactggcttgtgacaatgttgaagataccttt
atcttgcgggatggtgcatcagggctgtttcttgcggccagtcagttcccccgtaagcgg
gaaactcgcgcacctaaagtcgctgagttgttgccgcataaaggggaaattgatcctaag
tataaattcctcttcagtgcgccggttgccgatgacgaaggtaacccaacagttgtccgt
tatagtcgtaaaacaaaagagcagtacgttatgacggaagtcaatggcaaagccactggc
tggcgtgcattctataccggtggcagttggagcattgaagctgctaaagcgaagaagaaa
gcgacaaaaaagaaataa
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