Amphritea japonica: AMJAP_2568
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Entry
AMJAP_2568 CDS
T06992
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ajp
Amphritea japonica
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_2568 (sbcC)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMJAP_2568 (sbcC)
Archaeal homologous recombinant proteins
AMJAP_2568 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
ABC_tran
AAA_21
cobW
SMC_N
nSTAND3
NTPase_1
AAA_25
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
BBB27156
UniProt:
A0A7R6PDP2
LinkDB
All DBs
Position
complement(2907992..2911666)
Genome browser
AA seq
1224 aa
AA seq
DB search
MKILSLQFKNLNSLKGEWKIDFTQSPFVDNGLFAITGPTGAGKTTLLDAICVALYHQTPR
LGQISASTNEIMTRGTAECSAEVQFEVKGKAYRAHWSMRRSRGKSDGNLQQADVELAEVV
TGNVLATQIKQKNETIERITGLDFSRFTKSMLLSQGEFAAFLNAKEAERAELLEELTGTE
IYGRISEQVHLHFAEAKQKLAELNSQAKGVQLLTGEAKQQLQEELTLLQQQQAEHKINVS
ASSAHLNWWQQHDRGLQEIIANTERLEAVKEQQTLAQPALLRLQQSEPAEQLRIPFTLLQ
EAQLQRDNSEKLYNEKQISEQGVKVQMETAAASFDQQRVLLEETKKQHEQQELLINDQVV
PLDQNISAEQLRLNDKDNSIKEIVSKRDVDQQQLTSLNKQIKTEVVELEVVDQYLLQHKA
DGSLKQYLGQWQIQAEQILLEEAGLTQLINKTTGLQQQLTQQQNSHAADDKQYQAAMAET
GKLEQVWQQANGASVAASEQGDIDTLEQQRERLNTSYTQLLQLQPLSHRWQQLDTERQEK
QATEKSEQARQKTVKQTRDQLRAQYKKQEQLVKALSKLVTQDEQLAQFRADLQAGEECPL
CGSHDHPRLTGEVSDLSQAIKDREAAEQELNAIKEQGQDTAAALTSVERHLQELVQRLSA
IKTEQSALEQQWQQITRALNLSFPISDSQSLQQYEAAEQVKRQQSADAIQQLKALNKQRD
DAKQQWDNALRSAEQLKNRLELSEQAITNLSRSLLEVQQDKAKRSEQVIVQRESFTAQLT
EQGYRPPVSEELQEWLEAKQLDAKQWDEFSGKKEQLTSHLNRFSLEQTHCEKQLTGLEKQ
LTQLQQERELLSESLQRLKTQRSEIFGEKVVSQARTESQAQLQSAEATHKTAQESSHQLS
SAHKAQLAELNNQQQALNVSQTRLEARKSSWLTALSDSPFRTEEAFQQALLSEPERKVLQ
DKKRQLDSELAQAKALLDNAEQALTTVQENPLAVEYQKIPKEDIEAQISELNNTVEQLAR
RVGEISNELASDQNRRKDQQALFDEIEAYTEHYDDIQYLHSLIGSQKGDKFRKFAQGLTL
DNLVHLANQQLERLHGRYLLKRKQDAGLELSVLDTWQGDIERDTKTLSGGESFLVSLALA
LALSDLVSHKTSIDSLFLDEGFGTLDSETLDIALDALDNLNASGKMIGVISHIEAMKERI
PVQLRVVKKSGLGISELGAEYRVA
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattaagcctccagttcaaaaatctgaactctctgaaaggcgagtggaagatc
gacttcactcaatccccctttgtggataacggcctgtttgcgatcaccgggccgacggga
gcaggtaaaaccaccttgctcgatgcgatctgtgtagcgctttaccatcagacgccccgc
ttaggccagatctcggcgtcaaccaacgaaattatgacccgtggcaccgctgagtgctcc
gctgaagtgcagtttgaagtgaagggcaaagcctatcgtgcccattggagcatgcggcgt
tcccgaggtaagtcagacggcaatctgcaacaggcagatgttgagctggctgaagttgtt
acgggcaatgtgctggcaacccagataaagcaaaaaaacgaaacgattgaacgtatcact
ggcctggatttctcccgtttcaccaaatcgatgctgctctcccagggggagtttgccgct
tttctgaatgccaaagaagccgagcgagcagagttgttagaagagttaaccggcaccgag
atctatgggcggatctctgagcaggtgcacctgcactttgctgaggctaagcaaaagctg
gcagaactgaactctcaggccaaaggtgtacagttgctcactggtgaggctaaacaacaa
ttacaggaagagttaaccctgcttcagcagcaacaggctgaacataagatcaacgtttca
gcttccagtgctcacttaaactggtggcaacagcatgatcgtgggttgcaagagataatc
gctaacactgagcgcttagaagcggtcaaagagcagcaaaccctggcacaacccgctttg
ctgcgcttacagcagagtgaaccggcagaacaattgcgaatcccatttacgttactgcag
gaagctcagttacagcgtgataacagtgaaaagctctataacgaaaagcagatatcagag
cagggcgtaaaagtgcaaatggagactgccgctgccagcttcgatcagcagcgagtatta
ctcgaagaaaccaaaaagcagcatgaacagcaagagctgctgatcaatgatcaggtggtt
ccgctggatcagaatatcagcgctgaacagctaaggctcaacgataaagataacagtatt
aaagagattgtttcgaaaagagatgtcgaccaacagcagttaacctcgcttaacaagcag
attaaaactgaggttgttgagctcgaagtggttgatcaatatctgctgcagcacaaggcc
gacgggtcattaaaacagtacctgggtcagtggcaaatacaggccgaacagattctgctg
gaagaggctgggttaacccagctgatcaacaaaacaaccggtcttcagcaacagctgact
cagcagcagaactcacatgctgcagatgataaacagtatcaagctgctatggcggaaaca
ggcaaactagaacaggtctggcagcaggcaaatggtgcctcagttgcagcaagcgagcag
ggggatattgatacgttagagcagcaacgggagcggttgaataccagttacacccagttg
cttcaactgcagccgctcagtcaccgctggcagcagcttgatacagaacggcaggaaaag
caggcaaccgaaaagagcgagcaggcccgacaaaaaacagtcaagcagacacgagatcag
ttacgagcccagtataaaaaacaggagcagttggtaaaggcgctaagcaaactcgtcacc
caggatgaacagttagcccagttccgggccgaccttcaggccggagaggagtgccctctg
tgtggctcccatgatcatccaaggctgacgggcgaagtatccgacctgtctcaggccatt
aaagacagagaggcagccgagcaggagctcaacgctatcaaagaacaggggcaggatact
gctgccgcattgacctcagttgagcgtcatctgcaggaattagtgcaacggttaagtgcg
ataaagactgaacagtccgctttagagcagcagtggcagcaaatcacaagagctttgaat
ctcagctttccaattagcgatagtcaaagcctgcaacagtacgaagccgcggaacaggta
aagcgacaacagtctgcggatgcgattcagcaacttaaagcgctgaacaagcagagagac
gatgccaaacagcaatgggataacgcattgcgcagtgcagaacaactgaaaaacagactt
gagttgagtgagcaggcgataactaacctctccaggagtctgcttgaagtccaacaagat
aaagccaaacgctcagagcaggtcattgttcagcgcgagtcgtttactgcacagctaacc
gagcagggctaccgtccaccggtgtcagaagagctacaagaatggttagaagccaaacag
ctggatgcaaaacagtgggacgaatttagcggtaagaaagaacagctcactagccatctt
aatcgctttagtctcgaacagactcactgcgagaagcagctgacgggccttgaaaaacaa
ctgacacaattgcagcaggaacgggaactgttgagtgagtcacttcaacgattgaaaact
cagcgtagtgaaatttttggtgagaaggttgttagccaggcgcgcacagagagccaggct
cagctgcaatctgctgaggctactcataaaacagcgcaggagagcagtcaccagttatcc
agcgcgcataaagcccagctcgcggagctgaacaaccagcaacaagcgcttaacgtgtca
caaacccgtctggaagcgcgaaagtccagctggttaaccgcattgtcagacagcccgttt
cgcaccgaagaggcattccagcaggctctgctgtcagagccggaacgcaaagtgctacaa
gataagaagcggcagctggatagcgaactcgcacaggctaaagcattgctggataacgca
gagcaggcgctgacaaccgtacaggaaaacccactcgcagtggaataccagaaaatcccc
aaagaggatatcgaagcacagatcagcgaactgaataacactgtggaacagttggcaaga
cgggttggagagattagtaacgagctagcctcagaccagaaccgccgaaaagatcagcag
gcgctgttcgatgagattgaagcgtacaccgaacattacgatgatattcaatacctgcac
tcactgatcggctcacagaaaggcgataaattccgtaagttcgcccagggcctgaccctg
gataatctggtccatctggctaaccagcaactggaacgcctgcatggtcgatacctgctg
aaacgtaagcaagatgccgggttagagctcagtgtattagatacctggcagggtgatatc
gaacgggataccaaaaccttgtccggtggcgaaagctttctggtgagtctggcattggcg
ttggcgctctctgatctagtcagtcataaaaccagcatcgactccctgttcctggatgaa
ggctttggcacgctagacagtgaaacactggatatagccctcgatgcgttggataacctc
aacgcctccggcaaaatgatcggtgtcatcagccatatcgaagcgatgaaagagcgaatt
ccagttcagctcagggtggttaaaaagagtgggctggggattagtgagttgggtgcggag
tatcgggtggcctaa
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integrated database retrieval system
