Amphritea japonica: AMJAP_2569
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Entry
AMJAP_2569 CDS
T06992
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ajp
Amphritea japonica
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_2569 (sbcD)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMJAP_2569 (sbcD)
Archaeal homologous recombinant proteins
AMJAP_2569 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF3187
Motif
Other DBs
NCBI-ProteinID:
BBB27157
UniProt:
A0A7R6PBV4
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All DBs
Position
complement(2911663..2913042)
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AA seq
459 aa
AA seq
DB search
MKLLHTSDWHLGQSFFTKSRKAEHQAFLAWLLEQVAAHDIDAVIVAGDIFDTGTPPSYAR
EMYNQFIVAISQLNCTLVVLGGNHDSVSTLNESKQLVACLNTHVVANVVPSAVSTEVTED
TVRSEPTHTQIIELKNRAGDTGAILCAIPFIRPRDVIQSRAGESGLEKRQALGEAIKQHY
HQLYQAALAVREEKQLSVPIIATGHLTALGVSQSDSVRDIYIGSLDGFAADGFPPADYIA
LGHIHRPQMVAKSEHIRYSGSPIPLSFDELKTTKQVLLVEFDQAERVAITPLEVPRFQPM
AVIKGDLSSIESQLKAFDANTHENTPQTKSVWLCIEVELQDYLADLPQRIQTLIEGLSVE
QTLEQTLEQSLEQSLEQVVEQTVIPSFEVLQLRRTRNTAKQSLTQTARETLAELTPDDVF
AKRLELESFEGEVEQLRLGRIKEQFQQILSEVENPEQGA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcctacatacgtctgactggcatctgggtcagagcttttttaccaaaagccgc
aaagcggagcatcaggcatttctcgcctggttgttggagcaggtcgctgcccatgatatc
gatgcagtcatcgtcgctggtgatatctttgataccggcaccccgccgagctatgcacgg
gagatgtataaccagttcatcgtcgctatcagtcagttgaattgcacgctggtggtattg
ggtggcaatcacgattcagtatcgaccctgaatgaatcgaaacagctggtggcctgcctt
aatacgcacgtcgttgctaatgttgtcccgagtgctgtttccactgaagtaacagaggat
acagtcagatctgaaccgacccatactcaaatcattgagctaaaaaaccgtgcgggtgac
accggagccattctctgtgcgataccctttatccgtccccgcgatgttatacagagtcgt
gccggcgaatcgggtcttgaaaagcgccaggcattaggcgaggcgattaagcagcattat
catcagctgtatcaggcagcactggctgtcagagaagagaagcagttgagtgtaccgatc
atcgctaccggccatctcacggcgttgggcgtgagtcagtcagactcggtgcgtgatatc
tatatcggaagcctggatggttttgcggcggatggatttcccccggcggactatattgcc
ctgggacatatccacaggccacagatggtcgccaaatcagagcatatccgttatagcggc
tcgcccattccactgagctttgatgaactgaaaaccactaagcaggtgttgttagtggag
tttgaccaggctgaaagggtcgctattactccccttgaagtgccaaggtttcaaccgatg
gcggtgataaaaggggatctcagcagcatcgaatctcagctgaaagcgtttgatgctaat
acccatgaaaatacgccgcagactaaatcggtttggctctgtatagaggttgaactgcag
gactatctggcggatctgccgcaacgaattcagacactgatcgaagggttgagcgttgag
cagaccctagagcagaccctagagcagtccctagagcagtccctagaacaggtagtagag
cagacagtcattccttcctttgaagtattgcagctgcggcgtacacgtaataccgctaag
caatcgttaacccagaccgcacgtgaaactctggcagagttaacgcccgatgatgtcttt
gctaagcgactggaactggagagcttcgaaggtgaggtggagcagttgcgtctgggcagg
ataaaagagcagttccagcagatactgtcggaagttgaaaatccggagcagggcgcatga
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