Amphritea japonica: AMJAP_3172
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Entry
AMJAP_3172 CDS
T06992
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ajp
Amphritea japonica
Pathway
ajp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMJAP_3172 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_3172 (uvrA)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMJAP_3172 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMJAP_3172 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_23
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_25
AAA_21
nSTAND3
NACHT
Viral_helicase1
cobW
PriA_3primeBD
ScfRs
Motif
Other DBs
NCBI-ProteinID:
BBB27757
UniProt:
A0A7R6PCZ7
LinkDB
All DBs
Position
3612440..3615271
Genome browser
AA seq
943 aa
AA seq
DB search
MDKILVRGARTHNLKNIDLDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGEPRC
PDHDLPLAAQTISQMVDQVIALPEGTKLMLLAPVIQGRKGEHLHTINELQAQGFVRARVN
GIVCDIDSIPELDKNKKHNIEAVVDRFKVRDDLQIRLAESFETALNMTDGIATISYMDGD
GEELVFSARFACPKCGHSIQELEPRMFSFNNPHGACSSCDGLGVKQFFDPNKVVSDASLT
LSEGAIRGWDRRALYYFQQLKAVSEHYGFNIDTPFKDLNEKQQKVILEGSGTEDIAFRYL
NDRGDVISKSHPFEGVLNNLSRRYRETESDMVREDLSKYINMQECPGCDGSRLRRDARHV
YIDEQTLPEIVKLSIGDSCDYFDNLKLTGKQGEIADKILKEIRLRLEFLVNVGLDYLSLE
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLKTLIHLRDLGNTV
IVVEHDEDAIRLADYVIDVGPGAGVHGGEIIAQGTPAELMQSKDSITADYLSGRRQIAVP
GERHQQDGRWLQLHGASGNNLNDVDLDIPLGLLTCVTGVSGSGKSTLINSTLYPIAATEL
NNATTLTAAPYRELKGMEQLDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQEAR
SRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVKYKG
KSIHDVLAMTVEDGREFFEAIPALSRRLQTLIDVGLSYIRLGQAATTLSGGEAQRVKLAK
ELSKRDTGKTLYILDEPTTGLHFYDIQQLLNVLYRLRDHGNTIVVIEHNLDVIKTADWII
DLGPEGGVRGGEIIATGTPETVAEIKGSYTGEFLKPMLEKATN
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatactggttcggggcgctagaacccacaacctcaagaatatcgacctggat
atcccacgggataaactcgttgttatcacaggcttgtccggctcaggcaaatcttcgctg
gcatttgacacgctctatgctgaaggtcaacgacgctatgtagaatctctctcgacctat
gcccgtcagtttctgtcgatgatggaaaagcccgatgtcgatcatattgaaggtctgtca
ccggcaatatctattgagcaaaaatccacatcacacaaccctcgctctaccgtcggtaca
attactgaaatatatgactacctccgcttgctgtttgcccgggcgggagaacctcgctgc
ccggatcatgaccttccattggctgcacaaactatcagccagatggttgatcaggttata
gcgctacctgaaggcacgaagctgatgttactggcgcctgttattcagggccgtaaaggt
gagcatttacatactatcaacgaattacaggcacaaggcttcgtccgcgctcgcgtgaac
gggatcgtctgcgacatcgatagcattccagaactggataagaacaaaaaacataatatt
gaagcggtggttgaccgattcaaagtacgcgacgacctacagattcgcctagcggaatct
tttgaaaccgccctgaacatgactgatggtattgccactatcagctatatggatggcgat
ggtgaggaactggttttttcagcccgttttgcctgccccaaatgcggccatagcattcag
gaactggaaccccggatgttctcgtttaacaaccctcatggagcttgctcatcctgtgac
ggattgggtgtaaagcagttctttgacccaaacaaagtagtcagtgacgctagcctgacc
ctgtctgaaggcgcaattcgtggctgggaccgccgggcactttattattttcagcagctg
aaagccgtatctgaacattatggctttaacatcgacacccctttcaaagatctgaacgaa
aaacaacagaaagtgattctggaaggcagcggtacagaggatattgcttttcgttacctt
aatgatcgcggtgatgtcatcagcaaatctcacccctttgaaggcgtactgaacaacctg
tcacgacgctatcgggaaaccgaatccgatatggttcgtgaggatttatcaaaatatatc
aacatgcaggaatgccctggctgcgacggtagccgtctgcgacgagatgcacgccatgtg
tatattgatgagcagaccctgcctgagatagtcaaactctccatcggagatagctgtgac
tactttgataatctgaaactgaccggcaaacagggtgagattgccgataagattcttaag
gagatccgcctgcgactggagtttctcgtcaatgtcggcctggactacctgtcactagag
cgcagcgccgatacgctatccggtggtgaggcacagcgcattcgtttagccagtcagatc
ggtgctggtctggtaggcgttatgtatatccttgatgagccgtctatcggcctgcatcaa
cgagacaatgatcgcctgcttaaaaccctgatccatctgcgtgacctgggcaacaccgtc
atcgtcgtcgagcatgacgaagatgcgatccgcctggccgactatgttatcgatgtaggc
cccggggccggcgttcacggaggcgagattatcgctcagggcaccccggcagaactaatg
cagtcaaaagactccattacagccgattacctgtcaggccgtcgccagattgcagttcct
ggcgaacgccatcagcaagatgggcgctggctgcagctacatggcgcgtcagggaacaac
ctcaatgatgtagatctggacatacctctgggcctccttacctgtgtaaccggcgtatcc
ggttcgggcaagtcaacactgatcaacagtaccctgtatccaattgcggccaccgaatta
aacaacgccactaccctcacggcagcgccttacagagaactaaaagggatggagcagtta
gataaggtgatcgatatcgatcagagtcctatcggccgcaccccaagatccaatcccgcg
acctatacaggcatctttacgccaatcagggaactcttcgccggcacacaagaagcccgc
tcaaggggttataagccagggcgtttcagctttaacgtcaaaggtggacgttgcgaagcg
tgccagggcgacggtgtgatcaaggtcgagatgcacttcctgccagatatctacgttcct
tgcgatgtatgtaaaggcaagcggtataaccgagagacactcgaagttaaatacaaaggt
aagagtattcacgacgtactggcgatgaccgttgaagatggccgcgagttctttgaagct
atccctgcgctttctcgtcgcctgcaaacactgatcgatgtaggcctatcctatattcgc
ctggggcaggccgctaccacactgtccggtggtgaagcgcaacgagtgaaactcgccaaa
gagctgagtaaacgagataccggtaaaaccctctacattctcgatgaacctaccaccggc
ctgcacttctacgatattcaacaactgctgaatgtactctaccgcctgcgcgatcatggc
aacactatcgtcgtcatcgagcataacctagacgtaatcaaaactgccgactggatcatc
gatctggggcctgagggcggcgtaaggggcggtgagattatcgccacaggcaccccggaa
actgttgcagagattaagggctcttacaccggagagtttttgaaaccgatgttagaaaaa
gcgacgaactag
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