Amphritea japonica: AMJAP_3317
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Entry
AMJAP_3317 CDS
T06992
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ajp
Amphritea japonica
Pathway
ajp03030
DNA replication
ajp03410
Base excision repair
ajp03420
Nucleotide excision repair
ajp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMJAP_3317 (polA)
03410 Base excision repair
AMJAP_3317 (polA)
03420 Nucleotide excision repair
AMJAP_3317 (polA)
03440 Homologous recombination
AMJAP_3317 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajp03032
]
AMJAP_3317 (polA)
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_3317 (polA)
Enzymes [BR:
ajp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMJAP_3317 (polA)
DNA replication proteins [BR:
ajp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMJAP_3317 (polA)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AMJAP_3317 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMJAP_3317 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
WD40_4
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
BBB27902
UniProt:
A0A7R6SUQ5
LinkDB
All DBs
Position
complement(3766745..3769486)
Genome browser
AA seq
913 aa
AA seq
DB search
MTANTSPIILVDGSSYLYRAFFASQQADMRTSEGVPTGAVRLVTSMMRSLIKQYPDSPVA
MIFDAKGKTFRDDIYPDYKAQRPPMPDDLRTQIEPIHNIVRAMGFPLIAVEGVEADDVIG
TFAREASAKGLETIISTGDKDMAQLVDQHVSLINTMNDSYMDVDGVKEKFGIPPELIIDY
LALMGDKVDNIPGVPGVGEKTALALLQGIGGISDLYANLDKIASLGFRGSKTMAKKLEEN
REGAELSYLLATIKTDLELEMAIEDIPAPIADNEQLMALFQQCEFRTWVRDLDEKAPVTA
ASAEGEPEAPTEIEYETILDQAAFDRWLERLSSAELFAFDTETDSLNYMEANLIGLSFSI
EPGKAAYLPVAHDYMGSPDQLDRNGVLQQLKPLLESDTHKKVGQHIKYDMNVLARYGIQL
KGVAFDTMLESYALNSTATRHNMDALADFYLGVKTVKFEEIAGKGKKQLTFNQIEMEQAA
PYAAEDADITLRLHQTLFSKLEKEPSLASVFSDIELPLISVMARMEQQGAMVDATQLATQ
SMEHGARLKELETTAHELAGCPFNLSSPKQLQDILFEQQKLPVIKKTPKGAPSTAEEVLQ
ELALDYPLPKVIIEHRSLSKLKSTYTDKLPQMINPATGRIHTSYHQAVTATGRLSSSDPN
LQNIPIRSTEGRRIRQAFVAPEGYKLVAADYSQIELRIMAHLSQDKGLLNAFAQGEDVHK
ATAAEVFKVSLDEVTADQRRSAKAINFGLIYGMSAFGLGKQLGIGRNEAQKYIDHYFETY
PGVQRYMDDIRLQAAENGYVETLFGRRLYLPEIKASNGMRRQAAERTAINAPMQGTAADI
IKKAMVKVDRWLQSSDTGARMIMQVHDELILEVPEAELEAVSAELVELMQTAAKLDVPLL
VEAGTGDNWDQAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaatacctcccctattatcttagtcgatggctcctcatatctgtatcgggct
ttttttgcttctcaacaagctgacatgcgcacctctgagggggttccaaccggcgctgtt
cgattagttaccagcatgatgcgtagcctgatcaaacagtatcctgatagcccggtcgcc
atgatctttgatgcgaagggtaaaacctttcgtgatgacatttatccggactataaagcg
cagcgtccaccgatgccggatgacctgcgtactcagattgagcctatccataacattgtc
cgggcgatgggctttcccttgatcgccgtggaaggtgttgaggctgatgatgttatcggt
acgtttgcaagggaggccagcgcgaagggattagagactattatctctaccggcgataaa
gatatggcgcagctggtggatcagcatgtttctttgatcaataccatgaatgatagttat
atggatgttgatggcgtaaaggagaagtttggtattccgcctgagctgattatcgactac
ctggcgctgatgggagataaagtcgataacattcctggagtgccgggggtgggtgagaaa
actgcgctggctctgttacaggggatcggggggatcagtgacctttatgcgaatctggac
aaaattgcgtcgctgggttttcggggctcgaaaaccatggcgaaaaagctggaagagaac
cgggaaggagcggagttatcctatctgttagccacgattaaaaccgacctcgaattggag
atggcgatcgaggatatcccggctccgattgctgataatgagcaattgatggcacttttc
cagcagtgcgagtttcgaacctgggtgagagatctggatgagaaagcgcccgttacagct
gccagcgctgagggtgaacctgaagcgccaaccgaaattgaatatgaaacgattctggat
caggcagcattcgatcgctggttagagcgtcttagtagcgcagagttgtttgcattcgat
actgaaacagacagccttaactatatggaggcgaatctgatcggtttatctttttcgata
gaaccgggcaaagccgcttacctgccagttgcgcatgattatatggggtctccggatcag
cttgatcgtaatggcgtattacagcaactgaaacctctattggaaagtgatacccataag
aaggtcgggcagcatattaaatacgatatgaatgtacttgcccgttacggtattcagctt
aaaggtgttgcattcgatacaatgcttgaatcctatgcgcttaattctaccgcgacccgt
cataacatggatgcgctggcagacttctacctgggggtaaaaacggtcaagtttgaggag
atcgcgggtaagggcaaaaagcagctgacatttaatcagattgaaatggagcaagcggca
ccttatgcggctgaagatgctgatataacgttgcggttgcatcaaacgttattcagcaaa
ttagaaaaagaaccatcgctggcgagtgtcttttctgacatagagctgccactgatctcc
gtcatggcgcggatggaacagcagggagcgatggttgatgcgacccagcttgcaacacaa
agtatggagcatggtgctcgattgaaagagttagagacaactgcgcatgagttggcgggt
tgcccttttaatctgagttcgccgaaacagttgcaggatattctgtttgaacagcagaaa
ctgccagtgattaagaaaaccccgaaaggcgccccttcaaccgcagaggaagtgttgcag
gagctggcgctggattaccctctgccgaaggtgattatcgagcaccgcagtctgagtaaa
ctgaagagcacttatactgataagctgccgcagatgattaaccctgctaccggccggata
cacacgtcataccatcaggcggtgacggctaccggtcgactttcctcttctgatccgaat
ctgcagaacattcctatccggtctaccgaagggcggcgtattcgtcaggcctttgtcgcg
ccagaggggtataagctggttgctgcggattattcgcagattgagctgcgtatcatggct
catctgtcacaggataaaggcttattgaatgccttcgctcagggtgaggatgttcacaag
gcgacagctgcggaagtctttaaagtgagcctggatgaggtaacagcagatcagcgtcgc
agtgctaaggcgatcaattttggcttgatctacggtatgtcagcctttggtttgggtaaa
cagctgggtattgggcgtaatgaagcgcagaagtatatcgaccattactttgaaacctac
ccgggcgtacagcgctatatggatgatattcgtttacaagcggcagagaatggctacgta
gaaacactgtttggacgcaggctctatctgccggagattaaagccagtaatggaatgcgc
cgacaagcggctgaacgaacagcgattaatgcgccgatgcagggaactgcagccgatatc
attaagaaggcgatggttaaggttgaccgttggctgcagagtagtgataccggagccaga
atgattatgcaggtacacgatgaattgattctggaggtgcctgaggccgagctggaagcg
gtttccgcggaattagtagagcttatgcaaacagctgcaaagttggatgtgccactgctg
gtggaagctggaaccggtgataattgggatcaggctcactga
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