Amphritea japonica: AMJAP_3320
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Entry
AMJAP_3320 CDS
T06992
Symbol
uvrD
Name
(GenBank) DNA helicase II/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ajp
Amphritea japonica
Pathway
ajp03420
Nucleotide excision repair
ajp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMJAP_3320 (uvrD)
03430 Mismatch repair
AMJAP_3320 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_3320 (uvrD)
Enzymes [BR:
ajp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMJAP_3320 (uvrD)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMJAP_3320 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AMJAP_3320 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
Viral_helicase1
Mistic
Motif
Other DBs
NCBI-ProteinID:
BBB27905
UniProt:
A0A7R6PP69
LinkDB
All DBs
Position
3771123..3773339
Genome browser
AA seq
738 aa
AA seq
DB search
MDVSHLLDSLNEAQREAVSAPVCNMLVLAGAGSGKTRVLVHRIAWLVQTEGLSPYSIMAV
TFTNKAAKEMRGRIEELLGLSPAGMWVGTFHGLAHRILRAHWRDAGLMENFQIMDSDDQL
RLIKRLAKEMNLDDSRWPARQFQWFINAQKDEGLRARHIDPDGDPYAQVMVRVYAAYEDA
CDRGGMVDFGELLLRSLELLRDHNPALLEHYQDRFRYILVDEFQDTNAIQYAWLKILCQP
LDPRKPLPEKLMAVGDDDQSIYGWRGAKIENIQRFNQDFTETMVVKLEQNYRSTNTILQA
ANEVIRNNQGRLGKELHTDQPDGEQIALYSAFNEQDESRFIVDQIDSWVRKGNLRSESAI
LYRSNAQSRVLEEALIRANMPYRIYGGQRFYDRLEIKNALAYLRLVSNREDDTAMERVIN
VPTRGIGGKTIEEIRLHARTEGVSMWRASNEVIELNKLTPRAANALQAFIDLVNRIDQDT
AGTDLHEQTEHAIQKSGLIDHHLKEKGEKAQARIENLEELISAARQYLSTWQPDKEGNEN
STPLTAFLDDAALDAGEAQADEHQDSVQLMTLHSAKGLEFPLVFLAGMEEGLFPHKMSLE
EDGRLEEERRLCYVGITRAMEKLFITYAESRRLHGNETFNRPSRFIREIPDKHLEEVRLN
ASISRPVTARQQTRPSMFANAEVPDTQIVLGQRVSHPIFGDGIVTNYEGSGPKARVQVNF
DSEGSKWLVVGYANLQPL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcccatctacttgattccctgaacgaagcccagcgggaagcggtctctgct
cccgtctgcaacatgttagtactggcgggtgcggggtcgggtaagacccgggtactggtg
caccggatagcctggctggttcaaacagagggactttcaccctattccattatggcggtg
acctttaccaataaagccgccaaggaaatgcgcggccgcattgaagaactgttaggcctc
agccctgcagggatgtgggttggcactttccacgggctggcccatcgtattctgcgcgct
cactggcgcgatgccggtctgatggaaaacttccagattatggattccgatgatcagcta
cgactcatcaaacgtctggcgaaagagatgaacttggatgacagtcgctggcccgcccga
caattccagtggtttatcaatgcccagaaagatgaaggattacgagcccgacatatagac
cccgatggagatccctatgcccaggtaatggtccgggtatacgcggcttatgaagacgct
tgtgatcggggaggcatggtcgattttggggagttgttgttacgttcgctggaattgctc
agagatcataacccagcccttctggaacattatcaggataggtttcgctatattctggtc
gacgaatttcaggataccaacgccattcagtacgcctggcttaaaatcctgtgccagcca
ctcgatccgcgtaagccgttacctgagaaactgatggccgttggagatgatgatcagtca
atttatggctggcgtggcgctaagatagaaaatatccagcgcttcaatcaggatttcacc
gagacgatggtggtaaaactggagcagaactaccgctccacgaacaccattttgcaggcc
gctaacgaagtgattcgtaacaatcagggtcgactgggtaaagaactgcatacggatcag
cccgatggtgaacagattgccctctattcggccttcaatgaacaggatgagtcccgtttt
attgtcgatcagatcgacagctgggtacgcaaaggaaacctgcgcagcgaaagcgctatc
ctgtatcgctctaatgcccagtcccgggtgctcgaggaagcgttaatccgggctaacatg
ccctaccgtatctacggtggccagcgcttctacgatcgactggaaattaaaaatgccctc
gcctatttacgtctggtgagtaaccgggaagacgataccgcaatggagcgggtaatcaat
gtgcctacccggggcatcggtggaaaaaccattgaagagatccgactacacgcccgcacc
gaaggagtgtccatgtggcgtgcctccaatgaagtcatcgagttgaataaactcacaccc
agagcagccaacgccctgcaagcttttatagacctggttaaccggatagatcaggacacc
gcagggacagacctgcacgagcagaccgaacacgcgatccagaagtcaggcctgattgat
caccacctgaaagaaaagggcgagaaagcccaggcacgcatcgaaaaccttgaagaactg
atcagcgccgcacgacaatacctctcaacctggcaacccgataaagagggcaacgagaac
agcacccccctgaccgcgtttttggatgatgcagctcttgacgctggtgaggcacaggca
gatgaacaccaggattccgtgcagctgatgacgttacattcagcgaaaggactggagttt
cccctggtatttctcgctggaatggaagaaggcctgttcccccataagatgtctctggaa
gaggatggccgcctcgaagaggaacgcagactgtgctacgtgggcatcacccgcgccatg
gaaaagctgtttatcacttatgccgaatcccgtcgattgcatggcaatgaaacctttaac
cgaccatctcgatttatccgtgagataccggataaacacctggaagaggtacggctgaac
gccagcattagtcgcccggtaaccgctcgtcagcaaactcgtccatccatgtttgccaat
gcagaggtgccggatactcaaattgtactcggtcaacgggtatcacatcccatctttggt
gacgggatcgtaacaaactatgaaggctctggccccaaagcccgggtgcaggttaacttt
gactccgaaggtagcaaatggctggtagtcggctatgccaaccttcagccgctctga
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