Arthrobacter jinronghuae: N2K98_13230
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Entry
N2K98_13230 CDS
T09565
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ajr
Arthrobacter jinronghuae
Pathway
ajr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ajr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N2K98_13230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajr03021
]
N2K98_13230
03400 DNA repair and recombination proteins [BR:
ajr03400
]
N2K98_13230
Enzymes [BR:
ajr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N2K98_13230
Transcription machinery [BR:
ajr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N2K98_13230
DNA repair and recombination proteins [BR:
ajr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N2K98_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UWX77928
LinkDB
All DBs
Position
complement(2831214..2832224)
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AA seq
336 aa
AA seq
DB search
MLIAQRPTLTEEVVADNRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIEGVL
HEFTTVPGVKEDVTEIILNVKNLSVSSEHDEPVVAYLRKQGPGVVTAADIAPPAGVEFHN
PDLHIATLNSKGKFELELTIERGRGYVSASQNKSGDQEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDRLIVDVETKDAIAPRDAVASAGTTLVELFGLARELNTAAEGIEIGPSPTD
AALAADMALPIEDLELTVRSYNCLKREGIHTVGELVARSEADLMDIRNFGAKSIDEVKAK
LVELGLSLKDSPPGFDLAARAAAIEEDESEYSDDEL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctcactgaagaagtcgtagccgacaaccgctcacgg
ttcatcattgaacccctggagccgggtttcggttacacccttggtaactccctccgtcgt
accctgctgtcctccattcccggtgccgctgtaaccagcatccgcatcgagggcgtgctg
cacgagttcacgacggttcccggcgtcaaggaagatgtcaccgagatcatcctgaacgtc
aagaacctctcggtttcctccgagcacgacgaacccgttgtggcttacctgcgcaagcag
ggccccggcgtggttacggctgcggacatcgctccgccggccggcgtggagttccacaac
cccgacctgcacatcgccacgctgaactcgaagggcaagttcgaactcgaactgaccatc
gagcgcggccgcggctacgtgtcggccagccagaacaagtccggtgaccaggaaatcggc
cgcatcccggtcgactccatctactcgccggtcctgaaggtgaccttccgcgtggaggcc
acccgcgttgagcagcgcaccgacttcgatcgcctgatcgttgacgttgaaaccaaggat
gccattgcaccgcgcgacgctgtcgcctctgccggtaccaccctggttgagctgttcggc
ctggcacgtgaactcaacaccgccgctgaaggtatcgaaatcggtccgagccccacggat
gccgcactggcagccgacatggcactgccgatcgaagacctcgagctgaccgtgcgttcg
tacaactgcctcaagcgcgaaggcatccacaccgtgggtgaactcgtagcccgctccgag
gctgacctgatggacatccgcaacttcggcgcgaagtccatcgacgaggtgaaggcaaag
ctggttgaactgggtctgtccctgaaggattcccctcccgggttcgacctggccgcccgt
gccgcagctattgaagaggacgagtccgagtactcggacgacgagctctaa
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