Arthrobacter jinronghuae: N2K98_13480
Help
Entry
N2K98_13480 CDS
T09565
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ajr
Arthrobacter jinronghuae
Pathway
ajr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ajr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N2K98_13480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajr03021
]
N2K98_13480
03400 DNA repair and recombination proteins [BR:
ajr03400
]
N2K98_13480
Enzymes [BR:
ajr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N2K98_13480
Transcription machinery [BR:
ajr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N2K98_13480
DNA repair and recombination proteins [BR:
ajr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N2K98_13480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4407
Motif
Other DBs
NCBI-ProteinID:
UWX77973
LinkDB
All DBs
Position
complement(2876586..2880476)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSNDSTFGLMRIGLATADEIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEENRHAELPNLQAEHDVERKHLVDQRDSDIAAIAKDLEGE
LARLEGEGAKAADKKKARDSADRQMAKVRRDADNNIERLEQVWDRFKNLKVGDLEGDEGL
YRELRDRYGLYFEGSMGAEAIKKRLEDFDMQAESENLRDIIQNGKGQRKTRALKRLKVVN
AFLTTTNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERFR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKALQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLHHLTTKRDGAAGEGR
VFGSMAEAIMAFDMGELHLNALVKMRVDGFVPSATQPAPEGWEEGTPALIETSLGQVIFN
QTLPADYPWVKEVADKGQLSAIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIAAPIDKPAIMEGYEAQAAKVESQYGKGLIAEDERRQELIDIWNKATNEVAAAMRANMP
EFNNINRMVSSGARGNWLQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLNVTIAVPDSNGELQLHE
EVENSAYARTLATDVTDAQGNVLAKGGDDVGDVLIAKLFEAGVTDIKIRSVLTCESAVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRIQ
ELFEARTPKGVAPISETAGRVTLEETDRQMRLVVTPDDGSEEIAYPVLRRARLLVADGDH
VEVGQQLVFGAVDPKQILRILGPRKAQEFLVDEVQRVYRSQGVGIHDKHVEVIVRQMLRR
VTVIESGDSDLLPGELTERRRFESENRRVVSEGKKPASGRPELMGITKASLATESWLSAA
SFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKANLFT
GPSAFSDFDYAGVDGGLSPEFHAIPLDDYDMGSDFR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgattccacgttcggcctcatgcgaatcggccttgccaccgcggacgaaatc
cgcggttggtcttacggcgaagtcaagaagccggaaaccatcaactaccgaaccctgaag
ccggagaaggacggtcttttctgcgaaaagatcttcggtccttcccgcgactgggaatgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcacccgtgccaaggtccgccgcgaacgcatgggccacattgagctcgccgctccg
gtcacccacatctggtacttcaagggtgttccgtcccgtctgggctacctgctggacctg
gcaccgaaggaccttgagaaggtcatctacttcgctgcctacatgatcacctcggttgac
gaagaaaaccgccacgcggagcttccgaacctgcaggccgagcacgacgtggagcgcaag
cacctcgtcgaccagcgcgactccgacattgccgcgattgccaaggacctcgaaggcgag
cttgcccgcctcgagggcgaaggcgccaaggctgccgacaagaagaaggcacgcgactcc
gccgaccgccagatggccaaggtccgccgcgacgccgacaacaacatcgagcgcctcgag
caggtctgggaccggttcaagaacctcaaggtcggcgacctggagggcgacgaaggcctc
taccgcgaactgcgtgaccgctacggtctgtacttcgaaggctccatgggtgccgaagcc
atcaagaagcgtcttgaagacttcgacatgcaggccgagtccgagaacctgcgcgacatc
atccagaacggcaagggccagcgcaagacgcgtgccctgaagcgcctgaaggttgtcaac
gcgttcctgaccaccacgaacagcccgctgggcatggtcctggacgccgttccggtcatc
ccgccggaactgcgcccgatggtccagctcgacggcggccgtttcgcgacgtcggacctt
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgcctgctggatctc
ggtgcccccgagatcatcgtgaacaacgaaaagcggatgctccaggaagctgttgactcc
ctgttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctgctgggtaag
cgcgttgactactccggccgttctgtcatcgtcgttggcccgcagctgaagctgcaccag
tgcggcctgccgaagcagatggcactggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcccagaacatcaagagcgccaagcgcatggtcgagcgtttccgt
ccgcaggtctgggacgtgctggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacccaccctgcaccgcctcggcatccaggccttcgagccgcagctcgttgaaggtaag
gcccttcagctgcacccgctggtctgcggcgccttcaacgctgacttcgacggcgaccag
atggcagtccacctgccgctgagccccgaagcccaggctgaagcacgcatcctgatgctg
tcctcgaacaacatcctgaagccgtccgacggccgcccggtcaccctgccttcgcaggat
atgatcatcggtctgcaccacctcaccaccaagcgcgacggcgctgccggtgaaggccgc
gtgttcggttccatggccgaagccatcatggccttcgacatgggcgagctgcacctgaac
gcactggtaaagatgcgcgtggacggcttcgtccccagcgcaacccagccggcaccggaa
ggttgggaagagggcactcctgccctcatcgaaacctccctcggccaggtcatcttcaac
cagacgctgcctgcggactacccgtgggtaaaggaagttgccgacaagggccagctctcc
gcgatcgtcaacgatctggctgagcggtacccgaaggttgtcacggcagcaacgctggac
aacctgaaggacgccggtttctactgggccacccgctcgggcgttaccgttgccatctcc
gatatcgcggctccgatcgacaagccggccattatggaaggctacgaagcccaggctgcc
aaggttgaaagccagtacggcaagggcctgatcgctgaagacgagcgccgccaggaactg
atcgacatctggaacaaggccaccaacgaggttgctgctgcaatgcgggcgaacatgccc
gagttcaacaacatcaaccgcatggtgtcctccggcgcccgtggtaactggctgcaggtc
cggcagattgccggtatccgtggcctggtggccaaccctaagggtgagatcatcccgcgc
ccgatcaagtcctcgtaccgcgagggcctgtcggtgctggaatacttcatcgccacccac
ggtgcccgtaagggtctcgccgataccgctctgcgtaccgccaactcgggttacctgacc
cgccgtctggtggacgtttcccaggacgtcattgtccgcgaggaagactgcggcaccgag
cgcggcctgaacgtaaccatcgcggttccggactccaacggcgaactgcagctgcacgaa
gaggtcgagaactcggcgtacgcccgtacgctggccaccgacgtcaccgacgcacagggc
aacgtcctggccaagggcggcgacgatgtgggcgacgtcctcatcgccaagctgttcgaa
gccggcgtcaccgacatcaagatccgctccgtactcacctgtgagtccgccgtcggtacc
tgtgcactttgctacggccgctccctggccacgggtaagaccgtggacatcggcgaggcc
gtgggcatcattgccgcacagtccattggtgagccgggtacccagctgaccatgcgtacc
ttccacaccggtggtgttgcttccgctgaggacatcacccagggtctgccccgtatccag
gagctcttcgaagcacgtacgcctaagggtgttgctccgatctccgagaccgcgggtcgg
gtcacgctggaagagaccgaccgccagatgcgtctggttgtcactcccgacgacggctcc
gaggaaatcgcgtacccggtcctgcgccgtgcccgcctcctggttgccgacggcgaccac
gtcgaggttggccagcagctggtcttcggtgcggtggatcccaagcagatcctccgtatc
ctcggcccgcgcaaggcacaggaattcctggtggacgaagtccagcgcgtgtaccgcagc
cagggtgtgggcatccacgacaagcacgtcgaggttattgtccgccagatgctgcgccgc
gtaaccgtgatcgagtccggcgactccgatctgctcccgggtgagctgaccgaacgccgc
cgcttcgagagcgagaaccgccgcgtggtttcggaaggcaagaagcctgcttcgggccgt
ccggaactcatgggcatcaccaaggcctccctggccaccgagtcctggctgtccgcagct
tccttccaggagacaacccgcgtcctgacgcaggctgccatggaaggcaagagcgatccg
ctgctcggcctcaaggagaacgtcatcatcggtaagctgatcccggccggaacgggcctg
ccccgttacaccgaggtcactgtcgagccgaccgaagaagcaaaggccaatctcttcacc
ggcccgagcgccttcagcgacttcgactacgccggcgttgacggcggtctgagccccgag
ttccacgccatcccgctggatgactacgacatgggcagcgacttccgctaa
DBGET
integrated database retrieval system
