Arthrobacter jinronghuae: N2K98_14375
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Entry
N2K98_14375 CDS
T09565
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ajr
Arthrobacter jinronghuae
Brite
KEGG Orthology (KO) [BR:
ajr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajr03032
]
N2K98_14375 (topA)
03400 DNA repair and recombination proteins [BR:
ajr03400
]
N2K98_14375 (topA)
Enzymes [BR:
ajr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N2K98_14375 (topA)
DNA replication proteins [BR:
ajr03032
]
Prokaryotic type
DNA Topoisomerases
N2K98_14375 (topA)
DNA repair and recombination proteins [BR:
ajr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N2K98_14375 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UWX78135
LinkDB
All DBs
Position
complement(3059546..3062281)
Genome browser
AA seq
911 aa
AA seq
DB search
MPVKATDKKTGKKKLVIVESPAKGKTIAGYLGEGFEVTASMGHIRDLPQPSDLPADLKKT
GVGKFAVDLDNDFEPYYVVSADKKKKVAELKAALKDADELYLATDGDREGEAIAWHLLQV
LKPKVPVHRLTFPEITREAIQRALLEMRDVDVAMVDAQETRRILDRLYGYEISPVLWRKV
ARGLSAGRVQSVATRLVVERERERMAFRAASYWDLVGTFATEAAEKFKARLVSVDGARVA
TGKDFTDRGELKSKTAVHLDEAAAVSLAAGLESAAFTVRSVDTKPYTRRPAAPFTTSTLQ
QEAGRKLRFSSRVTMQVAQRLYENGYITYMRTDSPALSDQAINAARRQASELYGPEYVPE
ARRVYKGKSKNAQEAHEAIRPAGDSFRTPAQVASSLRGDEFRLYELIWKRTVASQMADAK
GSTASVRLGAVSADGRDAEFSASGTVITFRGFMAAYEEGRDAAREDDEAEGTEGARLPVL
KAQDTLTAADIAAGGHETSPPPRFTEASLVKMLEELGIGRPSTYAATISTIMDRGYVTSR
GQALVPSWIAFSVVRLLEEHFTDYVDYDFTAELEEDLDRISRGEAGRVEWLNQFYYGDRV
ETGLHTIVNDLGEIDAKAINSIEIADGIVLRVGKFGPYLERPLPADAPEGTEPERANVPE
DLAPDELTAEKAVELMETAAPEERVLGTDPETGRTIVARNGRYGPYVIELIPEPTEEDLA
NQPVEYYKNGKPKPPKKPVKVKPRTGSLFKSMSVETVTLDEALKLMKLPRVLGTDAEGNE
ITVQNGRFGPYLKKGTDSRSIGSEEEIFTITLEQALEIYSQPKQRGGRQAAAPLAEFGAD
PVSEKPIVVKDGRFGPYITDGITNITVPRSTAIEELTREQAIELLAEKREKGPAKKPVKK
RAAPRKATAKK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtgccagttaaggcaacggacaagaagaccggcaagaagaagcttgtaattgtcgagtct
ccggccaagggcaagaccatcgccgggtacctcggcgaaggcttcgaggtgacggcgtcg
atgggtcatatccgcgatcttccgcagccctccgacctgcccgcggacctgaagaagacg
ggcgtcggcaagtttgccgtggacctcgacaatgacttcgagccgtattacgtggtgtct
gcggacaagaagaagaaggtggccgagctcaaggccgcgttgaaggacgccgacgagctc
tacctcgcaactgacggtgaccgtgaaggcgaagccattgcctggcacctgctgcaggtg
ctcaagcccaaggtccccgttcaccggctgaccttcccggaaatcacccgcgaagccatc
cagcgtgccctgctggagatgcgcgacgtcgacgtcgccatggtggacgcccaggaaacc
cgccgcatccttgaccggctctacggctacgagatttcccctgtgctctggcgcaaggtc
gcccgcggcttgtccgccggacgtgtgcagtccgtcgccacccggctcgtggtcgaacgc
gagcgggagcgcatggcgttccgcgcggcgtcgtactgggacctggtgggaaccttcgcc
acggaagccgccgagaaattcaaggcccgcctggtctccgtcgacggcgcccgcgtcgcc
accggcaaggatttcaccgaccgcggtgagctgaagtccaagaccgccgtgcacctggac
gaagcagctgccgtctcgcttgccgccggcctggaatcggcggcattcaccgtccgttcg
gtggataccaagccgtacacccgccgtccggccgcgccgttcaccacctccaccctgcag
caggaagccggccgcaagctgcgcttctcctcgcgggtgacgatgcaggtggcccagcgg
ctgtacgaaaacggttacatcacctatatgcgtacggactccccggcgctgtcggaccag
gccatcaacgccgcccgccgccaggcctcggagctttacggccccgagtacgtgcccgaa
gcccggcgcgtctacaagggcaagtccaagaacgcgcaggaagcacacgaggccatccgc
cccgccggtgactccttccgcacccccgcacaggtggcctcctcgctgcgcggcgacgag
ttccggctctacgagctgatctggaagcgaaccgtcgcctcccagatggccgacgccaag
ggttccaccgcttccgtgcgcctcggtgcggtgtccgctgacgggcgcgacgccgagttt
tcggcttccggcacggtcatcaccttccgcggcttcatggctgcctatgaagagggccgc
gacgccgcccgcgaggacgacgaggccgagggcaccgaaggcgcccgcctgccggtgctg
aaggcccaggacaccttgactgctgcggacatcgctgccggcggacatgagacctccccg
ccgccgcggttcactgaagcgtcgctggtgaagatgctcgaagaactcggcatcggccgc
ccctccacgtacgccgccaccatctccacgatcatggaccgcggctatgtcaccagccgc
ggccaggcactcgtgccgagctggatcgcgttctccgtggtccgcctgctggaggaacac
ttcacggactacgtggattacgacttcaccgccgaactcgaagaagacctggaccgcatt
tcccgcggcgaggccggccgcgtggagtggctgaaccagttctactacggcgaccgtgtg
gaaaccggcctgcacaccatcgtgaacgaccttggcgaaattgacgccaaggcgatcaac
tcgatcgagattgccgacggcattgtgctgcgcgtgggcaagttcggcccctacctggag
cgtccgctgcccgcagacgcccccgaagggaccgagcccgagcgggcaaacgttcccgag
gacctggcccctgacgaactcaccgccgaaaaggccgtggaactgatggagaccgccgct
cccgaagaacgcgtgctgggcaccgatccggagacgggccggaccatcgtggcccgcaac
ggccgctacggtccgtacgtgatcgagctgatcccggaacccaccgaagaggacctggcc
aaccagccggtggagtactacaagaacggcaaacccaagcctccgaagaagccggtgaag
gtcaagccgcgcaccggctcgctcttcaaatccatgagcgtggaaacggtgaccttggac
gaggcgctgaagctgatgaagctgccgcgtgtcctgggcacagacgccgaaggcaacgag
atcacggtgcagaacggccggttcggtccgtacctgaagaagggcacggattcgcgctcg
atcggctccgaagaggaaatcttcacgatcacgcttgagcaggcgctggagatttattcc
cagcccaagcagcgcggcggccggcaggctgcggcaccgctggcagaattcggtgctgat
cccgtgtcggaaaagccgattgtggtcaaggacggccgcttcgggccgtacatcacggac
ggcatcaccaacatcacggtgccccgctccacggccatcgaagagctgacccgcgagcag
gccattgaactgctggcggagaagcgcgagaagggcccggcgaagaagcccgtgaagaag
cgtgcggctccgcggaaagctacagcgaagaagtag
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