Acidovorax sp. JS42: Ajs_0008
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Entry
Ajs_0008 CDS
T00455
Name
(GenBank) putative exonuclease, RdgC
KO
K03554
recombination associated protein RdgC
Organism
ajs
Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_0008
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ajs_0008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
ABM40264
UniProt:
A0A9J9KGL3
LinkDB
All DBs
Position
8260..9237
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AA seq
325 aa
AA seq
DB search
MFKNMIVYRIAPEWQVELTQLEEALAKAPFQECGATQEKSSGWVPPRGEAHGLLAESVGG
HWMLRFQWEAKMLPATVLARKVKEKAAQIEQQTGRKPGKKETKELKEEAKLDLLPMAFTK
QGGTWVWIDPQAHLLVLDTGAQGRADEVVSLLVEHLPGLSLALLDTQTSPQAAMALWLKE
QEPPAGFSIDRECELKAPDETKAVVRYARHPLDIEEVQGHIEAGKLPTKLAMSWDDRVSF
VLTEGLQLKKVAFLDTVFEGQTQDDGGFDADVAIATGELSQLIPDLIAALGGEGRTSLGG
AAAAPAPTAGALHAAASGPDDDAPF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaagaacatgatcgtgtaccgcattgcccccgaatggcaggtggagctgacccag
ctggaggaagcgctggccaaggcgcccttccaggagtgcggcgccacgcaggaaaagtcc
agcggctgggtgcccccgcgcggcgaggcccacgggctgctggccgagagcgtgggcggc
cactggatgctgcgcttccaatgggaagccaagatgctcccggccaccgtgctggcgcgc
aaggtgaaggaaaaggccgcgcagatcgagcagcagaccggccgcaagcccggcaagaag
gaaaccaaggagctcaaggaagaggccaagctggacctgctgcccatggccttcaccaag
cagggcggcacctgggtgtggatcgacccacaggcgcacttgctggtgctggacacgggc
gcccaaggccgtgccgacgaggtggtgagcctgctggtggagcacctgcccggcctgtcg
ctggcgctgctggacacgcagaccagcccccaggcggcgatggcgctgtggctcaaggag
caggagccgccggcgggcttttccatcgaccgcgagtgcgagctgaaggcgcccgacgag
accaaggccgtggttcgctacgcccgccacccgctggacatcgaggaagtgcagggccac
atcgaggcgggcaagctgcccactaagctcgccatgagctgggacgaccgcgtgagcttc
gtgctgaccgaggggctgcagctcaagaaggtggcgttcctggacacggtgttcgagggc
cagacgcaggacgatggcggcttcgatgccgacgtggcgatcgccacgggcgagctgtcg
cagctgattcccgacctgatcgcggcgctgggcggcgaggggcgcacgagcctgggtggc
gctgctgccgcccccgcaccaaccgccggggccttgcatgccgcggccagcggccccgac
gacgacgcgccgttctga
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