Acidovorax sp. JS42: Ajs_0205
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Entry
Ajs_0205 CDS
T00455
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
ajs
Acidovorax sp. JS42
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA_5
AAA_2
HTH_1
Mg_chelatase
HTH_30
AAA
AAA_16
AAA_22
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABM40460
UniProt:
A0A9J9KIG4
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Position
complement(223914..225614)
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AA seq
566 aa
AA seq
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MSCQRPPSPPLPSDADLRRLVHFSPVDGRIWLADQRMLLVHAAAFQALRRELVASLGQAH
TRRLLMRAGYASGERDALLARQVRPHASLFDAFAVGPQLHMLEGAVRVQPQVFEHDEAAD
HFHGVFQWDHSWEAEVHQRAWGPQDAPVCWMLVGYASGYTSAFFRRPVLFKETQCTACGH
AHCLIEGRFEHEWPDGEQLARDYDPDSMLVRLGELQSQVDALRTQLQPADDQGPLLGRSR
AFNDTVELLRKAAPTQVTVLLTGETGVGKERFARALHAMGPRADKPFVAVNCAALPAELI
ESELFGAEKGAYTGATAARVGRFERAHGGTLLLDELGELPLPAQAKLLRVLQQGEVERLG
GTQPRKVDVRVIAATNVDLEKAVEEGRFRRDLLYRLNVYPIRIPALRERADDIELLAMHL
LQRYAALHGKRLAGFTDLAMTAMRQHAWPGNVRELENLVERGVILAPHDDLVDAAMLFPT
SVLPTTHTVNAAGALESEAHCQQSAGLYDTLQASGLTLDALEDALIREAVARAGGNLAAA
ARALGLTRPQLSYRLSRLQERPLAAS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatgccagcgaccgccctccccccccttgccatccgatgccgacttgcgccgcctg
gtgcacttttcgcccgttgatgggcgtatctggctggctgatcagcgcatgctgctcgtc
catgcggcagcctttcaggcgctgcggcgcgaactggtggcaagcctggggcaggcgcac
acacgccgcctgctgatgcgtgcgggctacgcctcgggcgagcgcgacgcgctgctggcg
cgccaggtacggccccatgcctcgctgttcgacgccttcgccgtcgggccgcagttgcac
atgctcgagggcgcggtgcgcgtgcagccgcaggtgttcgagcacgacgaggcggccgac
catttccacggcgtcttccagtgggaccacagctgggaggccgaggtgcaccagcgcgcc
tggggcccgcaggatgcgcccgtgtgctggatgctggtgggctatgcctcgggctacacc
agcgccttctttcggcgtccggttcttttcaaggaaacgcagtgcaccgcctgcggccac
gcgcactgcctgatcgagggccgctttgagcacgaatggcccgacggcgagcaactggcg
cgcgactacgaccccgactccatgctggtgcgcctgggcgagctgcagtcgcaggtggat
gcgctgcgcacccagctacagcccgcggacgaccagggcccgctgctggggcgctcgcgc
gccttcaacgacaccgtggagctgctgcgcaaggccgcgcccacgcaggtcacggtgctg
ctgaccggcgagaccggcgtgggcaaggagcgctttgcgcgcgcgttgcacgccatgggc
ccgcgcgccgacaagcccttcgtggccgtcaactgcgcggcgctgccggccgagctgatc
gaaagcgagctgttcggcgccgaaaaaggcgcctacaccggcgccaccgccgcgcgcgtg
ggccgcttcgagcgcgcgcacggcggcaccttgctgctggacgagctgggcgagctgccc
ctgcccgcgcaggccaagctgctgcgcgtgctgcagcagggcgaagtggagcgcctgggc
ggcacgcagccgcgcaaggtggacgtgcgcgtgattgccgccaccaacgtcgatctggaa
aaagccgtggaagaagggcgctttcggcgcgacctgctctaccgcctgaacgtctatccc
atccgcataccagcgctgcgcgagcgcgcggacgacatagaactgctggccatgcacctg
ctgcagcgctacgccgcactgcacggcaagcgcctggcgggcttcaccgacctggccatg
accgccatgcgccagcacgcctggcccggcaacgtgcgcgagctggaaaacctggtcgag
cgcggcgtgatcctggcgccccacgacgacctggtggacgccgccatgctctttcccaca
tcagtccttcccacgacccacaccgtgaacgcggcaggagcgctggaaagcgaagcgcac
tgccagcaaagcgccggtctgtacgacaccctgcaagccagcggcctgacgctggacgcg
ctcgaagacgcgctgatccgcgaagccgtggcgcgcgcgggcggcaacctggcggcagcg
gcgcgcgcgctggggctgacccgcccacaactgagctaccgcctgtcgcgcctgcaagag
cggccgctggcggcttcgtga
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