Acidovorax sp. JS42: Ajs_0242
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Entry
Ajs_0242 CDS
T00455
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs00550
Peptidoglycan biosynthesis
ajs01100
Metabolic pathways
ajs01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ajs_0242
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ajs_0242
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ajs01011
]
Ajs_0242
Enzymes [BR:
ajs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Ajs_0242
Peptidoglycan biosynthesis and degradation proteins [BR:
ajs01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Ajs_0242
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
Motif
Other DBs
NCBI-ProteinID:
ABM40496
UniProt:
A0A9J9FRW0
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All DBs
Position
257100..259040
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AA seq
646 aa
AA seq
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MTELRNAEADVWHFRLRVFVVGVVVLLAFLLIVARLVVLQVVRHEDLADQAESNRTAVVP
IVPNRGLILDRNGVVLATNYSAYTLEITPSRTMDLEATIDALAEVVDIQPRDRRRFKRLR
EESRSFDSLPIRTRLSDEEVARFAAQRYRFPGVDIKARLFRNYPLGEVASHAIGYIDRIN
QREKERIEDSDDAANYRGTDYIGKLGVEQSFESTLHGQTGFERMETSAGGHAVRRLNSHP
ATPGNTVMLSLDIKLQKLIEDMFGERRGALVALDPRNGEVLALVSKPTFDPNLFVEGIDQ
ENWQALNESINKPLLNRALRGTYPPGSTYKPFMALAALELGKRTAGQVFNDPGYYNYGGR
TFRSHEGGLGGVDMHRAIQYSSNTYFYSLAVEMGVDAIHDFMKPLGFGQITGIDLGGEVR
GVLPSTEWKRNTYKRPEAKRWYSGETVSLGIGQGYNNFTMLQLAVAEATLANGGTRHRPH
LIKAVKDQVGGQVTEVQQPPGERLGYNPKHVAIVNNALMAVNQAGTGRRVFAGAPYTSAG
KTGTAQAVSLGQNVRYNAKLLEEHQRDHSLFAAFAPVEEPRIAVAVIVENAGFGAAAAAP
IVRRVFDYWLLGQYPSEQDLAAVSKGQAGAPMGTPRNVADVPLAMP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactgcgcaatgccgaggccgatgtctggcactttcgcctgcgcgtgttcgtc
gtgggcgtggtggtgctgctggcattcctgctgatcgtcgcgcgcctggtggtgctgcag
gtggtgcgccacgaggacctcgcggaccaggccgagagcaaccgcacggcggtcgtgccc
atcgtgcccaaccgcggcctcatcctggaccgcaacggcgtggtgctggccaccaactac
tcggcatacacgctggagatcacgccctcgcggaccatggacctggaggcgacgatcgac
gcgttggccgaggtcgtggacatccagccgcgcgaccggcgccgcttcaagcgtctgcgc
gaggagtcgcgcagctttgactccctgcccattcgcacacggctgtcggacgaagaggtg
gcgcgctttgcggcgcagcgctaccgcttccccggcgtggacatcaaggcgcggctgttt
cgcaactacccgctgggcgaggtggcgagccacgcgatcggctacatcgaccgcatcaac
cagcgcgaaaaggagcgcatcgaggactcggacgatgcggccaactaccgcggcacggac
tacatcggcaagctgggggtggagcagagcttcgaatccacgctccacggccagacgggg
ttcgagcgcatggagacctcggccggcgggcatgccgtgcggcgcctgaacagccacccg
gcgacgccgggcaacacggtgatgctgtcgctggacatcaagctgcaaaagctgatcgaa
gatatgttcggcgagcgccgcggcgctctggtagcgctggacccgcgcaacggcgaggtg
ctggcgctggtgtccaaacccacgttcgaccccaacctgttcgtcgagggaatcgaccag
gaaaactggcaggcgctcaacgagtccatcaacaagccgctgctcaaccgcgcgctgcgc
ggcacctaccctcccggctccacctacaagcccttcatggcgctggccgcgctggagctg
ggcaagcgcacggcggggcaggtgttcaacgacccgggctattacaactatggcgggcgc
accttccgcagccacgaaggcggcctgggcggcgtggacatgcaccgcgccatccagtat
tcgagcaacacctatttctattcgctggccgtggagatgggtgtggacgccatccacgac
ttcatgaagccgctgggcttcgggcagatcaccggcatcgacctcgggggcgaagtgcgc
ggcgtgctgcccagcaccgagtggaagcgcaacacctacaagcgcccggaggccaagcgc
tggtactcgggcgagacagtgtcgctgggcatcggccagggctacaacaacttcaccatg
ctgcagctggccgtggccgaggccacgctggccaacggcggcacccgccaccgtccgcac
ctgatcaaggccgtgaaagaccaggtgggcgggcaggtgaccgaggtgcagcagccccct
ggcgagcgcctgggctacaaccccaagcatgtggcgatcgtgaacaacgcgctgatggcc
gtgaaccaggcgggcacggggcggcgcgtgttcgcgggcgcgccctacacctcggcgggc
aaaaccggtacggcgcaggcggtgagcctggggcagaacgtgcggtacaacgccaagctg
ctggaggagcaccagcgcgaccattccctgtttgccgcgttcgcgcccgtggaggagccc
cgcatcgccgtggccgtgatcgtggagaacgcgggctttggcgcggcggcggcggcgccc
atcgtgcgccgcgtgttcgactactggctgctgggccagtacccgagcgagcaagacctg
gcggccgtctccaaggggcaggccggtgctcccatgggcacgccgcgcaacgtggcggac
gtgccgctcgcgatgccctga
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