KEGG   Acidovorax sp. JS42: Ajs_0488
Entry
Ajs_0488          CDS       T00455                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ajs  Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:ajs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ajs02048]
    Ajs_0488
Enzymes [BR:ajs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ajs_0488
Prokaryotic defense system [BR:ajs02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Ajs_0488
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C_2 Cas3-like_C Cas3_HD DEAD HD
Other DBs
NCBI-ProteinID: ABM40739
UniProt: A0A9J9FS80
LinkDB
Position
complement(508222..511758)
AA seq 1178 aa
MNVLFVAQCTKRALTETRRILDQFAERRGERTWQTPITQAGLDTVRKLLRQTARKNTAVA
CHWIRGRDHSELLWVVGDASQFNDQGAVPTNTTASSVLRAGDENAWHHLPLMTALAALAA
LLHDLGKATQAFQDRLQNPGLRERNHYRHEWVSVRLFQAFVGQDDDAGWLQRLAAYADAD
TDAQALEAAWLDHAGGRLLRDGLDEPQAKQHLPFARLPLLAQAVAWLVFSHHRLPCLPVE
QAQGVDAEDMEDGRRTYRRFGARPGFINTGDLDDVLLRINADWNEPRESAAPSTVQAHWH
FPHGLPVTQPAWRKQAARYARKLLELSQIAGQGAVLHDPFAMHVARLCLMLADHHYSSLT
DAAPRAPYLSPGYPLYANTRSNHYQNNSCSRLMDKRQSPIFNQTLDEHLLGVQAHATLVA
RSLPSLTRSLPALKNHKPLKKRSADPRFAWQDKAADLAASVRARAAHQGAFIVNMASTGC
GKTLGNARIMNALADPATGLRCAFAMGLRTLTLQTGRVFQNDLQLSDEQLAIQVGGAASR
ALFEYWEQQAEATGSASSQALLDEAGTVLYEGNDQHPLLQRLTDDAQARTLIAAPLLVCT
VDHLTPATESLRGGRQIAPMLRLLTSDLVLDEPDDFDMADLPALTRLVHWAGLLGSRVLL
SSATLPPALVEGLFLAYRAGRAVYQRHRSERPSEPVNICCLWVDEFRQTTQDCADGSAFR
EAHTQYVQKRVTKLQQAEVRRLAQIAPLPDTWHGMQEAERRKDFARLMLEQAWQLHQQPH
NHSTDADADDHTASGKRVSLGLIRMANIAPLYDVALAMYAPDALPPALQGLVRIHLCVYH
SQFPLLLRSAIEQQLDTLLNRRGAKDGHDPALHRPDLRALIDAHPEPHHLFIVLGSPVTE
VGRDHDYDWAVVEPSSMRSLIQLAGRVRRHRPGAIGGVNMVVLDSNLRHYKKPGQPAYEK
PGFETAHAPFQLKSHYLHDLLAREMCQTTAWAVDAQPRIALPADKLLPSRRWTDLEHARM
HDSLLPKPQGTATPTRAACLQWHEPQPDTPRSLWLTGLLPQFQRFRQDDQKRDDVALLPD
EEEETLQLHRVQDGERRYDKLYVPIHQSLCHPVPAAQLVSPSVSPWPQLGLMEELAALAQ
ARGLSLEQCAERYATASLPESQAGWRWHEQLGFNRKEG
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgaacgtgctcttcgtcgcgcaatgcaccaagcgtgcattgacggaaacccgccgcatc
ctcgatcagtttgcggagcggcgcggcgagcgtacctggcaaacgcccatcacccaagcc
gggctggacaccgtgcgcaagctgctgcgccagaccgcacgcaagaacaccgcagtggcc
tgccattggattcgtgggcgtgaccacagcgagttgctatgggtggtgggcgacgccagc
caattcaacgaccagggtgcggtgcccaccaacaccacggccagcagcgtgctgcgcgcg
ggcgacgaaaacgcctggcaccatttgccgctgatgaccgccctggctgcactggcggcc
ctgctgcacgacctgggcaaggccacgcaggccttccaagatcggctccaaaaccccggc
ctgcgcgagcgcaaccactaccggcatgaatgggtgtcggtgcggctgttccaggccttc
gtgggccaggacgatgacgccggctggctgcaacggctggcggcctatgccgacgcagac
accgatgcgcaggcactggaggcagcgtggctggaccatgcgggcgggcggctgttgcgc
gatgggctggacgagccccaggccaagcaacatttgccatttgcccgccttccgctgctg
gcccaggcggtggcgtggctggtgttcagtcaccatcgactgccctgcctgcctgtggag
caggcacaaggcgtggacgcagaggacatggaagacggcaggcgcacataccgccgtttc
ggtgcgcgccccggcttcatcaacaccggcgatttggacgacgtgctgctgcgcatcaac
gccgactggaacgagccacgtgagagcgctgcgccctccacggtgcaagcccactggcac
ttcccgcacgggctacccgtcacccaaccggcctggcgcaaacaggccgcccgctacgcc
cgcaaactgctggagctgtcgcaaatcgccggacaaggcgcggtgctgcacgaccccttt
gcaatgcacgttgcgcgcctgtgtctcatgctggcagaccaccattactccagcctcacc
gacgcagccccacgcgccccgtacctcagccccggctacccgctctacgccaacacccgc
agcaatcactatcaaaacaatagctgctcacgcttgatggataagcgccagagcccaatt
ttcaatcagacgttggacgaacatctgctgggcgtgcaggcccatgccacgctggtggca
cgctccctgcccagcctcacgcgcagcctgccggcgctcaagaaccataagcccctcaaa
aagcgcagcgccgacccgcgctttgcctggcaagacaaggccgccgacctggccgccagc
gtgcgcgcccgcgcagcgcatcaaggggcgttcatcgtcaacatggcctccaccggttgc
ggcaaaacactgggcaatgcccgcatcatgaacgcgctggccgaccccgccaccggcctg
cgttgcgcctttgccatggggctgcgcacgctcacgctgcaaaccgggcgcgtgttccag
aacgacctgcaactgagcgacgagcaactggccattcaggtcggcggtgcagccagccgg
gcgctgtttgaatactgggagcagcaggccgaggccaccggctcggcatccagtcaggcg
ctgctggacgaagcgggcaccgtgctctacgagggcaacgaccagcacccgctgctgcag
cgcctgaccgacgacgcccaagcccgtacgctgattgccgcgcccctgctggtgtgcacc
gtagaccaccttacccccgccaccgaaagcctgcgcggtggccgccagattgcgcccatg
ctgcgcctgctgaccagcgacctggtgctggacgagcccgacgactttgacatggccgac
ctgcccgctctcacccgtctggtgcactgggcgggcctgctgggcagccgcgtgctgctg
tcatcggccacactgccgcccgcgctggtggaagggctgttcctggcctaccgtgccggg
cgcgccgtgtaccagcgccaccgcagcgaacggcccagcgagcctgtgaacatctgctgc
ctgtgggtcgacgaattccgccagaccacccaggactgcgcggacgggtccgccttccgc
gaagcgcacacccagtacgtgcaaaagcgcgttaccaagctgcagcaggccgaggtgcgg
cgactggcgcagattgcgcccctgcccgacacctggcacggcatgcaggaagccgagcgc
cgcaaagactttgcccgcctgatgctggaacaggcttggcaactgcaccagcagccccac
aaccacagcacggatgccgacgccgacgaccacaccgccagcggcaaacgcgtgagcctg
ggtctcatccgcatggccaacattgccccgctgtacgacgtggcgctggccatgtacgcg
ccagacgcactaccacctgcgctgcaaggcctggtccgcattcacctgtgcgtgtaccac
tcgcagttccctctgctgctgcgctcggccattgagcagcagctggacaccttgctcaac
cgccggggtgccaaagacgggcacgaccccgcgctacaccgccccgacctgcgcgccctc
atcgacgcccaccccgagccccaccacctgttcatcgtgctgggcagccccgtgaccgaa
gtgggccgcgaccacgactacgactgggccgtggtcgagccctcgtccatgcgctcgctc
atccagctggccgggcgcgtgcggcggcaccggcctggggccataggcggggtgaacatg
gtggtgttggacagcaacttacggcattacaaaaagccaggccagcctgcgtatgaaaag
ccggggttcgagacagcgcacgcgccgttccagctcaagtctcactatttgcacgacctg
ctggcacgcgagatgtgccaaaccaccgcatgggcggtagacgcacaaccgcgcattgcc
ctgccagccgacaagcttctgcccagccgccgctggaccgacctggagcacgcccgcatg
cacgacagcctgctgcccaagccccaaggcaccgcaacgcccacgcgtgcggcctgcctg
caatggcacgaaccccagcccgacacgccccgatccctgtggcttaccggcctgttgccg
cagttccagcggttccgccaggacgatcaaaaacgcgatgacgtagccctgctgccagac
gaagaggaagaaacgctacaactacaccgcgtgcaagacggggagcggcgctacgacaag
ctgtacgtacccatccaccaaagcctgtgccacccggtgcccgcagcgcaactggtatca
cccagcgtatcgccctggccgcagttgggcttgatggaggaactggctgcactggcacag
gctcggggcttgtcgctggagcaatgtgcagaacgctatgccaccgccagcctgcctgaa
tcgcaggctggctggcggtggcacgaacaactgggtttcaatcgaaaggagggctag

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