Acidovorax sp. JS42: Ajs_1040
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Entry
Ajs_1040 CDS
T00455
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ajs_1040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ajs02000
]
Ajs_1040
Transporters [BR:
ajs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ajs_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
DUF8119
Motif
Other DBs
NCBI-ProteinID:
ABM41276
LinkDB
All DBs
Position
complement(1085191..1087017)
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AA seq
608 aa
AA seq
DB search
MEFITSNYAPVMFGSLIIFLLLGFPVAFSLGACGLLFGFLGIELGVFPSSVMAWLPQRLI
GIMANDTLLAVPFFTLMGLIMKRSGMAEDLLDTVGQVFGPLRGGLALAVVFVGALLAATT
GVVAASVISMGLISLPIMLRYGYDRRLASGVIAASGTLAQIIPPSLVLILMADQLGRSVG
EMYKGAFVPAFILVGLYVLWVVILAIFKPQSVPALPPEARIYREDNGSSGYASLAVVMGI
STAASIFLAAHMADVHTWWTGTEVLDVPTDEKVVTAMCGGTFIAFVIASINRVLKLGMLS
RLAERVTFVLIPPLLLIFLVLGTIFLGIATPTEGGAMGAMAALVMGFARRRLDMPLLKQA
LGATTRLASFVMFIMIGATTFSLVFQAADGPKWVEHLLASLPGGQVGFLIVVNLMIFFLA
FFLDYFELSFIVVPLLGPVADKMGIDLIWFGVLLAMNMQTSFMHPPFGFALFFLRSVAPD
KPYIDRVTHKAIQPVTTMQIYKGAIPFVLIQLIMVSLLIAFPSIVTGSLDKKVEVNMEAV
GAQMMDALQDAESYGAPGNDPFASQPAPDAEQAPAPAPEGELAPPADGGYGSDDPAKALQ
DAMGSGSK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaattcatcacaagcaattacgcccccgtcatgttcgggagcctgatcatcttcctg
ctgctgggcttccccgtggcgttcagcctgggcgcctgcggcctgctgttcggcttcctg
gggatcgagctgggggtctttccttcgtccgtgatggcctggctgccgcagcgcctgatc
ggcatcatggccaacgacacgctgctggcggtgcccttcttcacgctcatgggcctgatc
atgaagcgcagcggcatggcggaggacctgctcgacacggtgggccaggtgttcggccct
ttgcgcggcggcctggcgctggcggtggttttcgtgggcgcgctgctggcggccaccacc
ggtgtggtggcggcctcggtgatctccatgggcctgatctcgctgcccatcatgctgcgc
tacggctacgaccggcggctcgccagcggtgtgattgccgcatccggcaccctggcccag
atcattcccccatcactggtgctgatcctgatggccgaccagctcggccgcagcgtgggc
gagatgtacaagggcgcattcgtgcccgccttcatcctcgtcggcctctacgtgctgtgg
gtggtcatcctggccatcttcaagccccagtccgtacccgccctgccacccgaggcgcgc
atctaccgtgaagacaatggcagctccggctatgcctcgctggccgtcgtgatgggcatc
tccacggcagcatcgatcttcctagccgctcacatggccgacgtgcatacgtggtggaca
ggcaccgaagtgctggacgtgccgaccgatgagaaggtcgtcaccgccatgtgcggcggc
accttcatcgcgttcgtcatcgcgagcatcaatcgcgtgctcaagctgggcatgctctct
cgcctggccgagcgcgtgaccttcgtgctgattccgccactgctgctgatcttcctggtg
ctgggcaccatcttcctgggcattgccacaccgaccgaaggcggcgccatgggtgccatg
gcggcgctggtcatgggcttcgcgcgccggcgcctggacatgcccctgctcaagcaggcg
ctgggcgccactacgcgcctggccagctttgtgatgttcatcatgatcggcgccaccacg
ttcagcctggtgttccaggcggccgatggcccgaagtgggtggagcacctgctggccagc
ctgcccggcggacaggtgggcttcctgatcgtggtgaacctcatgatcttctttctggct
ttcttcctggactacttcgagctgtccttcatcgtggtgccgctgctgggacccgtcgcc
gacaagatgggcatcgatctgatctggttcggcgtgctgctggcgatgaacatgcagacc
tcgttcatgcacccgcctttcggcttcgcgctgttcttcctgcgctcggtggccccggac
aagccctacatcgaccgggtgacgcacaaggccatccagcccgtgaccaccatgcagatc
tacaagggcgccattcccttcgttctgatccagctgatcatggtgagcctgctcatcgcc
ttcccgtccatcgtgacgggcagcctggacaaaaaggtggaagtgaacatggaagcggtg
ggcgcgcaaatgatggatgcgctccaggatgcggagagctacggggccccaggcaacgac
ccgttcgcatcgcagcccgctccagacgccgagcaggcaccggcaccggcaccggagggc
gagttggcgccccctgccgacggcggctacggctcggacgacccagccaaggcgctgcag
gacgccatgggctcgggcagcaagtaa
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