Acidovorax sp. JS42: Ajs_1830
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Entry
Ajs_1830 CDS
T00455
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs03030
DNA replication
ajs03430
Mismatch repair
ajs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ajs_1830
03430 Mismatch repair
Ajs_1830
03440 Homologous recombination
Ajs_1830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajs03032
]
Ajs_1830
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_1830
Enzymes [BR:
ajs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ajs_1830
DNA replication proteins [BR:
ajs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ajs_1830
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ajs_1830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABM42017
UniProt:
A0A9J9FUP8
LinkDB
All DBs
Position
1905731..1909294
Genome browser
AA seq
1187 aa
AA seq
DB search
MPAFLQCRMFVHLRLHTEFSVVDGTTRIDEVVKAAAKDGQPALAITDLNNLFGAIKFYKE
GRGKGVKPILGAEIYLEAEAAGAPSRMVLLVQNRTGYLNLSELLARAWTRNIVRNQALCT
WEWLQELGDGLIALAGAQAGPVGQALMKGDDAGAAQLALRLAGIFPHRFYLEVQRAGRPD
DEAHVTAAVQLAARLALPVVATHPVQFATPDDYEAHEARVCIAEGEILANPRRVRRFTRE
QYFKSSAEMEALFADVPSALANTVEVAKRCNVSLVLGKPQLPNFPIPGGMTMEQYFRHAS
HEGLEERLLHLYPDTAERDRQRPRYQERLEFELGTILKMGFPGYFLIVGDFIQWAKKNGC
PVGPGRGSGAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQANRDRVID
YVKDKYGKEAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGQTYTLAYP
PEPKKEGDKNNYALELEPILYERVRKEEDVRTIIEMAQKLEGMTRNIGMHAGGVLIAPGK
LTDFCPLYQQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIMQRHKGQEN
FAFENIPLDDAATYKLFSDGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPM
DLIPSFVNRKHGKEVVEYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRR
AMGKKKAEEMAEHRAIFRKGAAEKGISQDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYH
TGWLKVHYTAEFYCANMTVEMDDTDKLKVLYEDAVKHFGMTFEPPDINRGNYRFEPVTDK
VIRYGLGAVKGTGQQAIEAIIAAREGQGVGPQGATRGPFKSLFDFCVRVDRTRVNKRTVE
ALIKAGAFDALQLNRAALVASLDRAFEFANAQIANANQGGLFDMMGDDAIGSSTQEPDLV
DVMPWGIKERLMQEKTAVGFYLSGHLFDEVHQEVRRFVRTAIDELVDSRETQVVAGIVSD
YRVINGQRGRLALFKLDDKSGVIEASADEGLINANAGLLKDDEFVVVSGRLQLDHFSGGL
RMKVQQVWDLAGARARYGRYLQVCLGQQLPDIGALVRDYPPQREETEHGEVLAHGLRVRM
QLRCTAAAGAATAEVQLGEASRFFPSDAALAAWSAQAGSGAVNVVYE
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgttcctacaatgccgcatgtttgtccacttgcgcttgcacactgaattttcc
gtcgtggacggaaccacccgtatcgacgaggtcgtcaaggcggcggcgaaagacggccag
cccgccctggcgatcactgacctgaacaacctgttcggcgcgatcaagttctacaaggaa
ggccggggcaagggcgtcaagcccatcctgggcgccgaaatctacctggaggccgaagcg
gcaggcgcaccctcgcgcatggtgctgctggtgcagaaccgcaccgggtatctgaacctc
tccgaactgctggcccgcgcgtggacgcgcaacatcgtcaggaaccaggcgctgtgcacc
tgggagtggctgcaggaattgggcgacggcctgattgccctcgctggagcacaggccggt
cccgtggggcaggcgctcatgaagggcgatgacgccggagctgcgcagctggcgctgcgt
ctggcgggcattttcccgcaccgcttctacctggaggtccagcgcgccggacgacctgac
gacgaagcccatgtcaccgccgcggtgcagcttgccgcgcgcctggccctgccggtggta
gccacccacccggtgcagttcgcaacgccggacgattacgaggcgcacgaggcgcgtgtg
tgcattgccgagggcgagatcttggcgaatccgcggcgcgtgcgccgtttcacgcgcgag
cagtatttcaagagcagtgccgagatggaagcgctgttcgccgatgtacccagcgccctc
gccaacaccgttgaggtggccaagcgctgcaatgtgtcgctggtgctgggcaagccgcaa
ctgccgaacttccccattccgggcggcatgacgatggagcagtacttccgccacgcgtcc
cacgagggcctggaggagcggctgctgcacctgtacccggacaccgccgagcgcgaccgc
cagcgcccccgctaccaggagcggctggagttcgaactgggcacgatcctgaagatgggc
tttccaggctacttcctcatcgtgggtgacttcatccagtgggccaagaagaacggctgc
ccggtgggccccgggcgcggctcgggtgcgggctcgctcgtggcctacgcgctcaagatc
acggatctggatccgctgcaatacaacctgctgttcgagcgcttcctgaaccccgagcgg
gtgtccatgcccgacttcgacatcgatttttgccaggccaaccgcgaccgcgtgatcgac
tatgtgaaggacaagtacggcaaggaggccgtgagccagatcgccacgttcggcacgatg
gcggccaaggctgccatccgcgacgtggggcgggtgatggatatgagctacacgttctgt
gacggtatctcgaagctggtgcccggcaaacccggccagacctatacgctggcctacccg
ccagagcccaagaaggaaggggacaagaacaactacgccctggagttggaacccatcctg
tacgagcgcgtgcgcaaggaggaggacgtgcgcaccatcatcgagatggcgcaaaagctc
gaagggatgacgcgcaatattggcatgcacgccggcggcgtgctgatcgcgccgggcaag
ctgaccgatttctgcccgctgtaccagcagcctggcagcgaatcggcggtgagccagtac
gacaaggacgacgtggaggccatcggcctggtgaaattcgacttcctgggcttggcgacg
ctgaccatcctggaaatcgcgcgtgagttcatcatgcagcgtcacaaagggcaggaaaac
ttcgcgttcgagaacattcccctggacgatgctgcgacctacaaactgttctcggacggc
aagacagaagccgtgttccagtttgaaagccggggcatgcaaggcatgctcaaggaagcg
cgcccaagcaggctggaagacctgatcgccttgaatgccctgtaccggcccggccccatg
gacctgattcccagcttcgtgaaccgcaagcacggcaaggaggtggtggagtacccgcat
ccgctggtggagcccgtgctggccgagacctacggcatcatggtctaccaggagcaggtg
atgcagacggcgcaggtgctgggtggttactcgctcggcggcgccgacatgctgcgccgc
gccatgggcaagaaaaaggccgaggaaatggccgagcaccgtgccatcttccgcaagggt
gcagccgaaaagggtatcagtcaggacaaggccgacgaggtcttcgacctgatggaaaag
ttcgcgggttacggcttcaacaagtcgcacgccgccgcctattcgctgctggcctaccac
accgggtggctcaaggtgcactacacggcggagttttactgcgccaatatgaccgtggaa
atggacgacaccgacaagctcaaggtgctctatgaagatgcggtcaaacatttcggcatg
accttcgagccgccggacatcaaccgcggcaattaccgcttcgagccggtgacggacaag
gtcatccgctatggcctgggcgcagtcaagggcacgggacagcaggcgatcgaggccatc
atcgctgcacgcgaagggcagggcgtgggcccacagggcgcaacccgggggcctttcaag
agcttgtttgacttttgcgtacgcgtggaccgcacgcgcgtcaacaagcgaacggtggag
gcgctcatcaaggcgggcgccttcgatgccctgcagctcaaccgtgccgcgctcgtggca
tccctcgatcgggcgttcgagtttgccaatgcgcagatcgccaacgccaaccaaggcggg
ctgttcgacatgatgggcgatgacgccatcggctccagcacgcaggagcctgatctggtg
gatgtgatgccctggggcatcaaggaacggctgatgcaggagaagaccgcggtgggcttc
tacctctcgggccacttgttcgatgaagtgcaccaggaagtgcgccgcttcgtgcgcacc
gctatcgacgaactggtagacagccgcgagacgcaggtggtcgccggcatcgtgagcgac
taccgcgtcatcaacgggcagcgcggcaggctggcgttgttcaagctggacgacaagtcg
ggcgtcatcgaggcttccgccgacgaagggctgatcaacgcgaacgccggcctgctcaag
gacgatgaattcgtagtggtgagtggtcggctgcagttggaccacttcagcggaggcctg
cgcatgaaggtgcagcaggtctgggatttggcgggtgcgcgggcacgctatgggcgctat
ctgcaggtgtgcctggggcagcagttgccagacatcggggcgctggtgcgtgactatcct
ccgcaacgggaggagacagaacacggcgaggtgcttgcccatggcctgcgcgtgcgcatg
cagttgcgctgcacagcggcggccggcgcggccacggccgaggtgcagttgggagaggcc
agccggttctttcccagcgatgccgcgctggccgcgtggagcgctcaggcgggcagcggt
gctgtgaatgtggtctatgagtag
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