Acidovorax sp. JS42: Ajs_2020
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Entry
Ajs_2020 CDS
T00455
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ajs_2020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajs03000
]
Ajs_2020
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_2020
Enzymes [BR:
ajs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Ajs_2020
Transcription factors [BR:
ajs03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Ajs_2020
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ajs_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
HTH_Tnp_1
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABM42196
UniProt:
A0A9J9FUS3
LinkDB
All DBs
Position
complement(2125170..2126723)
Genome browser
AA seq
517 aa
AA seq
DB search
MPDVLHSPAPPASAASAAGDDEARYLALRARDARFDGRFFTGVTSTGIYCRPVCAVRTPR
RENCRFFTLAAQAESAGFRPCLRCRPELAPQALAWSVQDASGILVRQALRMLDAPQSWGA
CEGGAVVAQLAARLGVSDRHLRRIFEAALGISPLQYLQTRRLLAAKQLLTDTDLPVTQVA
LASGFASVRRFNAAFNTHYGLNPTQLRRQGAAPDGVQAGARAVRLGLRPPYDTAALMGFL
AARQIHGMESIRTGPGAQVLRRTVRLASAGTVFTGWLEAGFDDGRPQLWLRVSDGLQPVL
PQLIARVRALFDLDADPQAINAVLHPSFPEGDGLRVPGAFDGFELAVRAVLGQQITVAAA
RTLAQRLVERFGEPIATPWPDLHRLFPTPAALAAAQGDALGSLGIVRQRQAAIVALAQAV
DAGTLLLDASADVPATLDALRALPGIGDWTAQYIAMRALRWPDAFPAGDVALHKALGVQG
QPQPARAATEAARAWRPWRSYGVLRAWSGLALALSDQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgttcttcattcccctgctccacccgccagcgccgcctctgcggcgggcgac
gacgaggcccgctacctggccctgcgggcccgggatgcgcgttttgacggacggttcttc
accggcgtgacctccaccggcatctactgccgccccgtctgtgccgtacgcacaccccgg
cgcgaaaactgccgtttttttacgctggcggcgcaggccgagagtgccggctttcgcccc
tgcctgcgctgccggcccgagctggcgccgcaggcgctggcctggtcggtgcaggacgca
tcgggcatcctcgtgcgccaggcgctgcggatgctggatgcgccgcagtcctggggcgcg
tgcgaaggcggcgccgtggtcgcgcagctggctgcgcgcctgggcgtgagcgaccggcac
ctgcgccgcatcttcgaggccgcgctgggcatctcgccgctgcagtacctgcagacgcgc
cggctgctggcggccaagcagttgctgaccgataccgatctgcccgtcacccaggtggcg
ctggccagcgggtttgccagcgtgcgccgcttcaacgcggctttcaatacccactacgga
ctcaatcccacccagttgcgccggcaaggcgccgcacccgatggggtacaggcaggcgct
cgagcggtgcgtctgggcctgcgcccgccctacgacacggccgcgctgatgggctttctg
gcggcgcggcagattcacggcatggagagcatccgcaccgggccgggggcgcaggttctg
cgcagaacggtgcggctggcgagcgcgggcaccgttttcaccggctggctggaagccggt
ttcgatgacgggcgcccccagctgtggctgcgcgtcagcgacggcctgcagcccgtgctg
ccgcagctcatcgcgcgggtgcgcgcattgttcgacctggacgcggacccgcaggccatc
aacgcggtgctgcacccctccttcccggagggcgacggcctgcgtgtgccgggcgcgttc
gacggcttcgagctggcggtgcgcgccgtgctgggccagcagatcacggtggccgccgcg
cgcacgctggcgcagcggctggtggagcgctttggcgagcccatcgccacgccatggccg
gacctgcatcggctgtttcccacaccggccgctctggccgcggcgcaaggggacgcactg
ggcagcctgggcatcgtgcgccagcggcaggccgccatcgtggcgcttgcgcaggccgtg
gacgcgggaacgctgctgctggatgccagcgccgacgtacccgccacgctggacgcgctg
cgtgccctgcccggtattggcgactggacggcgcagtacatcgccatgcgcgcactgcgc
tggcccgacgcctttccggccggtgacgtggcgctgcacaaggcgctgggcgtgcagggc
cagccgcaacccgcgcgcgccgccaccgaagcagcccgcgcctggcgcccctggcgcagc
tatggcgtgctgcgcgcgtggagtggtttggctctggcgctatcagaccaatag
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