Acidovorax sp. JS42: Ajs_2038
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Entry
Ajs_2038 CDS
T00455
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs00061
Fatty acid biosynthesis
ajs00071
Fatty acid degradation
ajs01100
Metabolic pathways
ajs01212
Fatty acid metabolism
ajs02024
Quorum sensing
ajs04146
Peroxisome
Module
ajs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Ajs_2038
00071 Fatty acid degradation
Ajs_2038
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Ajs_2038
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ajs_2038
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ajs01004
]
Ajs_2038
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajs04147
]
Ajs_2038
Enzymes [BR:
ajs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Ajs_2038
Lipid biosynthesis proteins [BR:
ajs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Ajs_2038
Exosome [BR:
ajs04147
]
Exosomal proteins
Exosomal proteins of breast milk
Ajs_2038
Exosomal proteins of breast cancer cells
Ajs_2038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABM42214
UniProt:
A0A9J9KHS1
LinkDB
All DBs
Position
complement(2145017..2146846)
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AA seq
609 aa
AA seq
DB search
MNSPTPDLRGVQTLPELLAFRAALTPHSEAYRACDPGTGQWISLTWAQTQERVQQCSRAI
AASGLPQGARIAILLPNGLDAMSIDQAVMATGCVPVPLHAIDNPGSIAYILADAEVSLLV
VEEPEQWRRIRDVGMPLPHLMGVVTTNASTGLPTAAEQDVPVAPLAAWLQHAAADTPLPS
PPGPEDLAAIVYTSGTTGKPKGVMLSHANVVADVKAVLERIAPTPQDVFLSFLPLSHTFE
RTGGYYLPMASGSCVVYARSVAQLAEDLKNVRPTVLVSVPRIYERVHAKLIETLSPSPLK
MQLFQAAQAVGWKRFCAAQRLPAPQDDGAGGWMRALPWPLLRALVAKPLLAQFGGRVRVA
VSGGAPLSPTIAHCFLGLGLQLVQGYGMTETSPVVSVNTLEDNDPSTVGRALPGVEVRIG
ENRELQVRGPIVMKGYWKRPEDTARTVSADGWLGTGDQAEIVDGRIRILGRIKEIIVTST
GEKVPPADLELAITADALFEQAFVVGEQRPFIACVAVVHAEEWRQLAGQLGLDANDPASL
AHPSAQRAALARIEKLAAGFPRYAVPRAVHLVREPWTIENAFMTPTLKLKRTNLMAHYAA
AIEAMYQKR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccccacccccgacctgcgcggcgtgcagacgctgcccgaactgctggcgttc
cgcgccgccctcactccccacagcgaggcgtaccgcgcctgcgaccccggcaccggccag
tggatcagcctgacctgggcacagacccaggagcgcgtgcagcagtgcagccgcgccatt
gccgcatcgggcctgccacagggggcgcgcatcgccatcctgctgcccaacgggctggat
gccatgagcatcgaccaggctgtgatggccacgggctgtgtgcccgtgcctctgcatgcc
atcgacaatccgggcagcattgcctacatcctggcggatgccgaggtgtcgctgctcgtc
gtggaagagcccgagcaatggcggcgcatccgcgacgtgggcatgccgctgccgcacctg
atgggcgtggtgacgaccaacgccagcaccggcctgcccaccgccgccgagcaggacgta
ccggtcgcaccgctggctgcctggctgcagcatgccgcggcagatacgccgctgccctcg
ccgcccggccctgaggatctggcggcgatcgtctacaccagcggcactaccggcaagccc
aagggggtgatgctcagccatgccaacgtggtggccgacgtgaaggcggtgctggagcgc
atcgcccccacgccacaggatgtgttcctgtccttcctgccgctgtcgcacaccttcgag
cgcacgggcggctactacctgcccatggcctcgggcagttgcgtggtctatgcgcgctcg
gtggcgcaactggcggaggacttgaagaatgtgcgccccacggtgctggtgtcggtgccg
cgcatttatgaacgcgtgcatgccaagctcatcgagacgctgtcgccctcgcccttgaag
atgcagctgttccaggccgcgcaggccgtgggctggaagcggttttgcgccgcgcagcgc
ctgccagcaccccaggacgacggcgcgggcggctggatgcgcgccctgccctggccgctg
ttgcgtgccctggtggccaagccgctgctggcgcagttcggtggccgcgtgcgcgtggcc
gtgagcgggggcgcgccgctgtcgcccaccatcgcgcactgcttcctgggcctgggcctg
caactggtgcagggttacggcatgaccgaaacctcgcccgtggtcagcgtgaacacgctg
gaggacaacgacccgtccaccgtcggccgcgccttgccgggcgtggaggtgcgcatcggc
gagaaccgcgaactgcaggtgcgcggccccatcgtcatgaagggctactggaagcgcccc
gaggatacggcccgcaccgtctccgccgacggctggctgggcacgggcgaccaggccgag
atcgtcgacggccgcatccgcatcctgggacgcatcaaggaaatcatcgtcacctccacg
ggcgagaaggtgccgccggccgacctggagctggccatcaccgccgatgcgctgttcgag
caggcctttgtggtgggcgagcagcgccccttcatcgcctgcgtggccgtggtgcatgcc
gaagagtggcgccaactggccgggcaactgggactggacgccaacgaccctgccagcctt
gcgcaccccagcgcccaacgagcggcactggcgcgcatcgagaagctggcggccggcttc
ccgcgctatgcggtgccgcgcgccgtgcatctggtgcgcgagccatggacgatcgagaac
gcgttcatgacacccacgctcaagctcaagcgcaccaacctcatggcgcactacgcggcc
gccatcgaggccatgtaccaaaagcgctga
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