Acidovorax sp. JS42: Ajs_2458
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Entry
Ajs_2458 CDS
T00455
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs03420
Nucleotide excision repair
ajs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ajs_2458
03430 Mismatch repair
Ajs_2458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_2458
Enzymes [BR:
ajs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ajs_2458
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ajs_2458
MMR (mismatch excision repair)
Other MMR factors
Ajs_2458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_22
AAA_16
UvrD_C_2
DEAD
FtsK_SpoIIIE
NACHT
SLFN-g3_helicase
nSTAND3
AAA_25
AAA_29
ATPase
Motif
Other DBs
NCBI-ProteinID:
ABM42619
UniProt:
A0A9J9KI29
LinkDB
All DBs
Position
complement(2612889..2614649)
Genome browser
AA seq
586 aa
AA seq
DB search
MNEPCKLRESVMACEGHALVIGGPGSGKTTLALRKAVKRIRDGMLPGQSALFLSFSRAAV
ARILDAAKLESTKAEQEQLSIQTFHSFFWDILKAHAYLLGAPHRLSILLPHDEKALSGGL
GDEDEGWDEWLVERERLFREEGRIAFDLFAPNATALLARSSHLLASIAHRHPIIIVDEAQ
DTGQYAWQCIQMLAPHTQVLCLADLEQQIFDYLPGVGPERVIAIREALKPHEIDLGTQNH
RSPDSEILAFGNDILTAKPRGAPYKGVSALAYRPEKPPPNWNHLLRRALGELLKSIRAQS
DKKVETIAILVTNNRSALKMSNALNALGANVGKPVRHKLLFDEAEALLSARFAAFLLEPK
DLAKLEADVATSMEMIAAARRATGQGRKEVAKLLEQANKIKGGKALNINIANALRGLISG
LAVNDFSGDPAEDWLTVKHELRATNQDELTRVAAQLDFLVAFRRGHRISAALSDEWLRDG
AYTNARTALDLALAQEQILDGVEPPMGLQVMNFHKAKGKQFDGVILVREARRTGPAVESS
FVWRGDTALYPKSRRVLRVGITRAKVHTLILDPLWPQCPLLKGHKL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagccttgcaagctgcgcgaaagcgtcatggcttgcgagggccatgccttggtc
atcggcggccccggcagcggcaagacgacgctcgcgctgcgcaaggcggtcaagcggatt
cgcgacggcatgcttccgggtcagtcggccttgttcctgagcttctcgcgggcggcagtg
gcgcgcatcttggatgccgccaagctcgagtccaccaaagccgaacaggagcagctctcc
atccagacgttccattcgttcttctgggacatcctcaaagcccacgcctacctgcttggg
gcaccgcataggctctcgatcttgctgccacacgacgagaaggccctgtcgggcggcctc
ggcgacgaagacgaaggctgggacgagtggctcgtcgagcgtgagcggctgtttcgcgaa
gaggggcggatcgcgttcgacctgttcgcgcccaatgcgacagctctgttggctcgcagc
tcgcatcttttggcgtcgatcgcccatcggcatcccatcatcatcgtggacgaggcccag
gacaccggccagtacgcgtggcagtgcatccagatgctcgcaccacacacgcaggtgctg
tgcctggcagacctcgaacagcaaatcttcgactacctgccaggcgtcggcccggagcgc
gtgatcgccatccgggaggcgttgaagccgcacgagatcgaccttgggacgcagaaccac
cgcagcccggactccgaaatcttggcgttcggcaatgacatcctgacggccaagccacgc
ggcgcgccctacaagggcgtatccgcccttgcctaccgccccgagaagccaccgccgaac
tggaatcatctgctgcgccgagccctcggggagctcttgaaatcaattcgggctcagagc
gacaagaaggtggagacgatcgcgatactggtcaccaacaaccgcagtgcgttgaagatg
tccaacgccctcaacgcgttgggggccaatgtcgggaagccggttcggcacaagctgctg
ttcgacgaggccgaagcgctgctgtcagcccgtttcgcggcctttctgctggaacccaag
gacctcgccaaactggaggccgatgtcgccaccagcatggaaatgatcgccgccgcgagg
cgcgcgacgggacagggccggaaggaagtcgccaaactcttggagcaggccaacaaaatc
aagggtggcaaggccctgaacatcaacatcgccaacgccctgcgcggcctgatctcaggc
ttggcagtcaacgatttcagcggcgatcccgccgaggactggctcaccgtcaaacatgag
ctgcgggcgaccaatcaagacgaactcacgcgggtcgctgcgcagttagacttcttggtg
gcgttccgtcggggacatcgcatctcggctgccctctctgatgaatggcttcgcgacggc
gcctacaccaatgcccgcaccgccctcgacctggctctcgcacaggagcaaatcctcgac
ggcgtggagccgccgatgggcttgcaagtcatgaatttccacaaggccaagggcaagcag
ttcgacggagtcatcctcgtccgcgaagctcgtcggaccggccccgccgtcgaatcatct
ttcgtttggcgaggcgacaccgctctgtatcccaaaagccgacgtgtgcttcgagtcggc
atcacgcgagcaaaagtccacacgctcatcctcgatccgctttggccccaatgtcccctg
ctcaaggggcacaagctctaa
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integrated database retrieval system
