Acidovorax sp. JS42: Ajs_2470
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Entry
Ajs_2470 CDS
T00455
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
ajs
Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajs03032
]
Ajs_2470
03036 Chromosome and associated proteins [BR:
ajs03036
]
Ajs_2470
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_2470
DNA replication proteins [BR:
ajs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ajs_2470
Chromosome and associated proteins [BR:
ajs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Ajs_2470
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Ajs_2470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ABM42631
LinkDB
All DBs
Position
2630821..2631132
Genome browser
AA seq
103 aa
AA seq
DB search
MTRSDLVEELAARFGQLTQRDAEYAVKTILDAVSDALVRGHRIEIRGFGSFSVNRRPPRM
GRNPRSGEAVHIPEKRVPHFKPGKALRETVDQRTAELQGVQAQ
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatctgacctcgtcgaagaactggctgcccgcttcgggcagctcacccagcgc
gacgccgaatacgccgtcaagaccattctggacgccgtgagcgatgcactggtgcgcggg
caccgcatcgagatccgcggctttggcagcttctcggtcaaccgccgccccccgcgcatg
ggccgcaatccgcgcagcggcgaggcggtgcatatccccgaaaagcgcgttccccacttc
aaacctggcaaggccctgcgcgaaaccgtggaccagcgcaccgctgaactgcagggcgta
caggcgcaataa
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