Acidovorax sp. JS42: Ajs_2562
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Entry
Ajs_2562 CDS
T00455
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
ajs
Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajs03021
]
Ajs_2562
03009 Ribosome biogenesis [BR:
ajs03009
]
Ajs_2562
Transcription machinery [BR:
ajs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Ajs_2562
Ribosome biogenesis [BR:
ajs03009
]
Prokaryotic type
rRNA transcription factors
Ajs_2562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_KhpA-B
RNA_pol_A_CTD
KH_1
Motif
Other DBs
NCBI-ProteinID:
ABM42720
UniProt:
A0A9J9FVN2
LinkDB
All DBs
Position
complement(2726377..2727861)
Genome browser
AA seq
494 aa
AA seq
DB search
MNRELLMLVEAISREKNVERDVVLGAVESALAQATKKLYQGEVDIRVSIERDSGEYETFR
RWLVVPDDAGLQNPDAEELLMDARERVADIEVGEYIEEAVESVPIGRIGAMAAKQVILQK
IRDAEREMLLNDFMSRGEKIFTGTVKRMDKGDIIVESGRVEGRLRRGEMIPKENLRNGDR
VRAMIMEVDLTLRGAPIILSRSAPEFMIELFRNEVPEIEQGLLEIKSCARDPGSRAKIAV
LSHDKRVDPIGTCVGVRGTRVNAVTNELAGERVDIVLWSDDPAQFVIGALAPANVTSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLASDLTGWKINIMDAAESAQKQANETDAARRL
FMEKLDVDEEIANILIEEGFASLEEVAYVPLQEMLEIESFDEDTVNELRARAKDALLTME
IVREESVESVSQDLRDLEGLTPELIAKLAEGGVHTRDDLADLAIDELTELTGQSAEDATA
LIMKAREHWFTGQE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgagttgttgatgttggtagaagccatttcgcgcgaaaagaacgtggagcgc
gatgtggtcctgggcgctgtggagtctgctctggcacaggccacgaagaagctctaccag
ggtgaagtggacatccgcgtgtcgattgaacgcgacagcggcgaatacgagactttccgt
cgttggctggtggtgcccgacgatgccggattgcagaaccccgacgcagaagagctgctg
atggatgcccgcgaacgggtggccgatatcgaggtgggggagtacatcgaggaagccgtc
gagtcggtaccgatcggccgcatcggggccatggcggccaagcaggtgatcctgcaaaag
atccgcgatgccgaacgcgagatgctgctcaacgatttcatgtcacgcggcgagaaaatt
ttcaccggcacggtgaaacgcatggacaagggcgacatcatcgtcgagagcggccgggtg
gaagggcgcctgcgtcgcggcgagatgatcccgaaggaaaacctgcgcaatggggaccgt
gtgcgcgccatgatcatggaggtggacctcacgctgcgcggagcgcccatcatcctctcg
cgctccgcgccggagttcatgatcgagttgttccgcaacgaggtgcccgagatcgagcag
ggtctgctggagatcaaaagctgtgcccgtgaccccggcagccgcgcgaagatcgctgtg
ctcagccatgacaagcgcgtggaccccatcggcacctgcgtgggcgtgcgcggaacgcgt
gtgaacgccgtgaccaacgaactggcgggagagcgcgtggacatcgtgctgtggtccgac
gaccctgcgcagttcgtgatcggcgcgcttgctccggccaacgtgacttccatcgtggtc
gacgaagagaagcacgccatggacgtcgtggtggacgaggaaaacctcgccatcgccatc
gggcgcggcggccagaacgtgcgcctggcgtccgacctcacgggctggaagatcaacatc
atggatgcggccgaatccgcgcagaagcaggccaatgaaaccgatgccgcacgtcgcctg
ttcatggagaagctggatgtggatgaggagatcgccaacatcctgatcgaggagggcttc
gccagcctcgaggaagtggcctatgtgccgctgcaggaaatgctggagatcgagagcttc
gacgaggacacggtgaacgagctgcgcgcacgcgccaaggatgcgctgctcaccatggaa
atcgttcgtgaagaaagcgtggaaagcgtatcgcaagacctgcgtgacctcgaaggtctg
acgcccgaactgatcgccaagttggcggaaggtggcgtgcatacgcgtgacgacctggcc
gatttggccattgacgaactgaccgagctgaccggccagtctgccgaagatgcgaccgcc
ttgatcatgaaggcgcgcgagcactggttcacggggcaagagtaa
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