Acidovorax sp. JS42: Ajs_3265
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Entry
Ajs_3265 CDS
T00455
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ajs_3265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_3265
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ajs_3265
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ajs_3265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ABM43388
UniProt:
A1WAW3
LinkDB
All DBs
Position
complement(3450047..3450835)
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AA seq
262 aa
AA seq
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MAARRIADEPAYVLHSYDWSESSLILETFTRHYGRVALVAKGAKKPTSNFRPVLLPLQPL
RVTYTLGGEGHGEIHALKGAEWAGGHVMPTGDALLSGLYLNELLLRLLAREDTHAPLFDT
YAGVVRVLATVDHEGEHGDALEPVLRSFELLLLREIGLLPGLDAETSTLAPLHAAARYAL
VPEAGLRPAVPADRAALSGGQWLALQGALDEPARYTATLRAIATAEAPVAADLKTQLRAL
LQYHCGSPLLRTRQLMMDLQKL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgccgcatcgccgacgagcccgcctacgtactccacagctacgactggagc
gaatccagcctgatcctggagacgttcacgcgccattacggccgcgtggcgctggtcgcc
aaaggggcgaagaagcccacctccaactttcggcccgtgctgctgccgctgcagccgctg
cgggtgacctacacactgggcggcgaggggcatggcgagatccatgcgctcaagggcgcg
gagtgggcgggtggccatgtcatgccgacgggcgatgcgttgctgtcgggcctgtacctc
aacgaactgctcctgcggctgctggcgcgtgaggacacccacgcgccgctgttcgatacc
tatgccggcgtggtgcgcgtgctggcaaccgtggaccacgagggggaacatggcgatgcg
ctggagcccgtgctgcgcagcttcgagctgctgctgctgcgcgagatcggcctgctgccg
ggcctggatgccgagacctccacgcttgctccgctgcacgcggcggcgcgctacgcgctc
gtgccggaagccggcctgcgcccggccgtgccggccgaccgggcggcgctttcgggaggc
cagtggctggccctgcagggcgcgctggacgagcccgcgcgctacaccgccacgctgcgg
gccatcgcgacagccgaggcgccggtggcggccgatctcaagacgcagttgcgtgcgctg
ctgcaataccactgcggcagccccttgctgcgcacgcgccagttgatgatggatctgcag
aaactctga
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