Acidovorax sp. JS42: Ajs_3308
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Entry
Ajs_3308 CDS
T00455
Name
(GenBank) choline/carnitine/betaine transporter
KO
K02168
choline/glycine/proline betaine transport protein
Organism
ajs
Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ajs02000
]
Ajs_3308
Transporters [BR:
ajs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ajs_3308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCCT
Motif
Other DBs
NCBI-ProteinID:
ABM43430
LinkDB
All DBs
Position
complement(3494055..3496151)
Genome browser
AA seq
698 aa
AA seq
DB search
MSNERSLSGGHGSGPQGQPPAAGSEAGPRFTFSAPVVVPSLLVLGLLLVLCGMFPQQAVR
FFTGVQVWVVGHFDWFYSAAVTLFLVFLALVAASSFGDIRLGPDDAKPDFSFLSWTAMLF
AAGMGIGLMYFGVGEPLQHYIKPPMAPAGTANAAREALQSTFFHWGFHAWAVYGTMGLVL
AYFGFRYNLPLTMRSGLYPLLQQRINGPIGHTVDAFALVGTIAGIATTLGYGALQLAAGI
GLLTGWDTNTALFRVAVVAVVAILAGLSAVTGLDKGVRVLSEFNLALSFVLLAFVIAFGP
TVHLFQALSENVGNYFSGLVQMSLRTFAYEAPQQPGWYGDWTVLYWAWWISWSPFVGMFI
ARISRGRTVREFIVGVLLVPTAFNLLWMTAFGNSAIWIDTHVAQGALAQTAGNVDALLFR
FFEYLPFVKIVSWLAIVLISVFFITSADSGAYVLDAIATRGNPRSPVWQRLFWAAVLGVT
AAVLLVAGGLKALQALTLAAALPVAAIMVALCWGLWRAMQADRAHASQDLAMATNFWSGQ
HWRKRLEQIVHQPTRADVLRFMQATVLPAMRDVVAELGRRGVQAHVQDDTAVADPDAAQI
RLTIPMPELRDFVYGVRPVRRKLPGFMLAEVAPQDKERLYVVEPITFFADGRSGYDIQYL
RGEEVIADILRHYERYLSASASQSTQLLNRAPGHDGPV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgaacgctccctctctggcggtcacggctctgggccgcaggggcagccgcct
gcggctggctccgaggcaggcccacggtttacgttttcggctccggtggtggttccgtca
ttgctggtgctgggcttgctgctggtgctgtgcggcatgttcccgcagcaggctgtccgc
tttttcaccggtgtgcaggtctgggtggtgggccactttgactggttttacagcgcagcg
gtgacgctgttcctggtctttctggcgctggtggcggccagcagttttggcgacatccgc
ctgggccccgatgatgcgaagcccgatttcagctttctgtcgtggaccgcgatgctgttt
gccgcaggcatgggcatcgggctcatgtactttggcgtgggcgagccgctgcagcactac
atcaaaccgcccatggcgccggcaggcacggccaacgcggcgcgcgaggccctgcagtcc
acgttttttcactgggggtttcatgcctgggcggtgtacggcaccatgggactggtgctg
gcgtatttcggctttcgctacaacctgccgctgaccatgcggtcgggcctgtacccgctg
ctgcagcagcgcatcaacgggcccatcggacatacggtggatgctttcgcgctcgtgggt
accatcgcgggcattgccaccacgctgggttatggcgcgctgcagctggctgcaggcatt
ggactgttgaccggctgggacaccaacaccgcgctgtttcgcgtggccgtggtcgccgtg
gtggcgatcctggccgggctgtcagccgtcacgggtttggacaaaggggtgcgcgttctg
tccgagttcaacctggcgctgtccttcgtgctactggctttcgtcatcgctttcgggccc
accgtccatctgttccaggcgctgagcgagaacgtcggcaactatttctccggcctggtg
cagatgtcgctgcgcacctttgcctacgaggcaccgcagcagcccggctggtacggcgac
tggacggtgctgtactgggcatggtggatctcctggtcgcccttcgtgggcatgttcatt
gcgcgcatctcacgcgggcgtactgtgcgcgaattcatcgtcggcgtgctgctcgtgccc
accgcattcaacctgctgtggatgacggcgtttggcaacagtgccatctggattgacacc
catgttgcgcagggcgcgctggcccagacggctggtaacgtggatgcgctgttgtttcgc
ttcttcgagtacctgccgttcgtgaaaatcgtttcgtggctggccatcgtgctgatctcg
gtgttcttcatcacatctgccgactcgggcgcgtacgtgctggacgcgatcgcaacgcga
ggcaacccgcgctcgccggtgtggcagcggctgttctgggccgccgtgctgggcgtgacg
gcggcggtgctgctggtggcgggcggcctcaaggcgctgcaggccttgacgctggcggct
gccctgcccgtggcggccatcatggtggcgctgtgctggggtctgtggcgcgccatgcag
gccgaccgcgcccatgcctcgcaagatctggccatggccaccaacttctggagcgggcag
cactggcgcaagcggctggagcagatcgtgcaccagcccacgcgcgctgacgtgctgcgc
ttcatgcaggccacggtgctgcccgccatgcgcgatgtggtggcagagttgggccgccgc
ggcgtgcaggcgcatgtgcaggacgacaccgccgttgccgaccccgatgccgcccagatc
cgcctgaccatccccatgcccgagctgcgcgattttgtctatggcgtgcgccccgtgcgg
cgcaagctgccgggcttcatgctggccgaggtggcgccgcaggacaaggagcggctctac
gtggtggagcccatcaccttttttgccgacgggcgatcgggctacgacatccagtacctg
cgtggcgaagaggtcattgcggacatccttcggcattacgagcgctatctgtcggccagt
gccagtcaaagcacgcagctgctcaaccgcgccccaggccacgacgggcccgtgtga
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