Acidovorax sp. JS42: Ajs_3324
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Entry
Ajs_3324 CDS
T00455
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs03420
Nucleotide excision repair
ajs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ajs_3324
03430 Mismatch repair
Ajs_3324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_3324
Enzymes [BR:
ajs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ajs_3324
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ajs_3324
MMR (mismatch excision repair)
Other MMR factors
Ajs_3324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABM43446
UniProt:
A0A9J9KL93
LinkDB
All DBs
Position
complement(3519378..3521828)
Genome browser
AA seq
816 aa
AA seq
DB search
MLPHDLFSGAPAPFGTGNGAGATGVSSQAVQPLLQNLNPEQLAAVTLPAGHALILAGAGS
GKTRVLTTRIAWLLQNGLATPGGILAVTFTNKAAKEMLTRLSAMLPINVRGMWIGTFHGL
CNRLLRAHHKLAGLPQAFQILDTQDQLSAIKRLCKQFNVDEERFPPKQLAYFIAGCKEEG
MRPRDVPAHDADTRKKVELYQLYEEQCQREGVVDFGELMLRSFELLRDNDPVRAHYQRRF
AHILVDEFQDTNKLQYAWLKQMAGDVVDGRLHTQGSVLAVGDDDQSIYAFRGARVGNMQD
FVREFDVQHQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGPGEPVRIYEANSD
LAEAQWMVDEIKQLVRDGEMPRKEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFER
AEIKHALAYLRLLENPHDDTSFLRVVNFPPRGIGARTLEVLQDAARSSGCSLHDAVSAVP
GKAGTNLGAFVALVQVLREQTQGQNLRGIIGQVLESSGLLEHYRHEKEGADRLENLDELI
NAAESFVTQEGFGRDAVALPLDEHGNALTQSPASQGLDPDAPMLNAPGNVDADTGETLSP
LAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDCVFIGGMEEGLFPHENSMSDRD
GLEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPEEALKWIMPRQAG
FGSFAPDLGAARAYQSGARGQFGFKTEVFASPPVPPVKAAPGHGLRVGLAVFHTKFGEGK
VLAIEGADADARAQVHFPRHGTKWLALSVAKLTIVE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctcccacacgacctgttttccggcgcgccagcgccttttggcactggcaatggtgcc
ggcgctaccggggtttcgtcccaggcggtgcagccgctgctgcaaaacctcaaccccgag
caactggccgccgtgacgctgcctgccggccatgcgctcatcctggcgggcgccggctcc
ggcaagacccgggtgctcaccacgcgcattgcctggctgctgcagaacggtctggccact
ccgggcggcatcctggccgtgaccttcaccaacaaggcggccaaggagatgctgacgcgc
ctctcagccatgctgcccatcaacgtgcggggcatgtggatcggcacattccacggcctg
tgcaaccgcctgctgcgcgcgcaccacaagctggcaggcctgccgcaagccttccagatc
ctggacacgcaggaccagctctcggccatcaagcggctgtgcaagcagttcaacgtggac
gaggagcgcttcccacccaagcagctggcctacttcatcgctggctgcaaggaagagggc
atgcgcccgcgcgacgtgccggcgcacgatgccgacacgcgcaagaaggtggagctgtac
cagttgtacgaggagcagtgccagcgcgagggcgtggtggactttggcgagctgatgctg
cgcagctttgagctgctgcgcgacaacgaccccgtgcgggcgcattaccagcggcgcttt
gcgcacattttggtggacgagttccaggacaccaacaagctgcaatacgcctggctcaag
cagatggcgggcgacgtggtggacggacgcctgcacacgcagggcagcgtgctggccgtg
ggtgacgacgaccagagcatctacgcctttcgcggggcacgcgtgggcaacatgcaggac
ttcgtgcgcgagttcgacgtgcagcaccagatcaagctggagcagaactaccgcagctac
agcaacatcctggactcggccaacgcgctgatcagccacaacagccggcgcttgggaaaa
aacctgcgcaccacgcagggcccgggcgagcccgtgcgcatctacgaggccaacagcgac
ctggccgaggcgcagtggatggtcgatgagatcaagcagctcgtgcgggacggcgagatg
ccgcgcaaggagatcgctgtgctctaccgcagcaatgcgcagagccgggtgatcgaatcg
gccctgttcaacgccagcgtgccctaccgcgtgtacggcgggctgcgctttttcgagcgc
gccgagatcaagcacgcgctggcctacctgcgcctgctggagaacccgcacgacgacacc
agctttctgcgcgtggtgaacttcccgccgcgcggcattggtgcgcgcacgctggaggtg
ctgcaggatgcggcgcgcagcagtggctgctcgctgcacgacgcggtgagtgcggtgcct
ggcaaggccggcaccaacctgggtgccttcgtggccctggttcaagtgctgcgcgagcag
acgcagggccagaacctgcgcggcatcatcggccaggtgctcgaatccagcggcctgctg
gagcattaccgccacgaaaaggaaggcgcggaccggctggagaacctggacgagctcatc
aacgcggccgagagcttcgtcacccaggagggctttggccgcgatgcggtcgcgctgccg
ctggacgagcacggcaacgccctcacgcaaagcccggccagccaggggctggaccccgac
gcgccgatgctgaatgcccctggcaacgtggatgccgacaccggcgaaacgctgtcgccg
ctggcggccttcctgacccacgccgcattggaggcgggggacaaccaggcccaggcgggg
caggatgcggtgcagctcatgaccgtgcatgccagcaaggggttggagttcgactgcgtg
ttcatcggcggcatggaggaagggctgttcccgcatgagaactccatgagcgaccgcgac
ggcctggaggaagaacgccgcctgatgtacgtggccatcacccgcgcgcgcaagcgtctg
tacctgagccattcgcagacgcgcatgctgcacgggcagacgcgctacaacgtcaagagc
cgcttctttgatgagctacccgaggaggcgctcaaatggatcatgccgcgccaggcaggg
tttggatctttcgctcctgatttaggagctgctcgcgcttaccagtcgggcgctagaggc
caatttggcttcaagaccgaagtattcgccagtccccccgtacccccggtcaaggcggcg
ccgggccatggcctgcgcgtggggctggcggtgttccacaccaagttcggcgagggcaag
gtgctggccatcgagggcgcggacgccgacgcgcgggcgcaggtgcactttccgcgccac
ggcaccaagtggctggcgctgtcggtggccaagctcaccatcgtcgaataa
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