Acidovorax sp. JS42: Ajs_3823
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Entry
Ajs_3823 CDS
T00455
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs02020
Two-component system
ajs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ajs_3823
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ajs_3823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajs03021
]
Ajs_3823
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ajs02035
]
Ajs_3823
Transcription machinery [BR:
ajs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ajs_3823
Bacterial motility proteins [BR:
ajs02035
]
Flagellar system
Flagellar assembly proteins
Stator
Ajs_3823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ABM43930
LinkDB
All DBs
Position
4058393..4059106
Genome browser
AA seq
237 aa
AA seq
DB search
MYTAKGQLDRDALFHQHVPLVRRIAHHMIAKLPPNVELDDLIQVGMIGLNDALSRYEVAQ
GVQFETFASQRIRGAMLDELREGDWMSRSSRKSQKDIEHALHRVEQRLGRSPIESEIAAE
LGMSLEDYQALLSKVRGTQLVYLEDFHHDDEDEGFLDRHVADEGADPMAVLRDQRLRASL
VEAIKALPEREQYIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQAIARLRTKMRGH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgcgaaaggccagctcgaccgggacgcgctgttccaccagcacgtgcccctg
gtgcggcgcatcgcccaccacatgatcgccaagctcccgcccaacgtggagctggacgac
ctgatccaggtcggcatgatcggtctgaacgacgcgctctcgcgctacgaagtcgcgcag
ggcgtgcagttcgagacctttgccagccagcgcatccgcggcgccatgctcgacgagctg
cgcgagggcgactggatgagccgcagctcgcgcaagagccagaaggacatcgagcatgcc
ctgcaccgcgtggagcagcgcctgggccgcagccccatcgagtccgagatcgccgccgaa
ctgggcatgagcctggaggactaccaggccctgctgagcaaggtgcgcggcacgcagctg
gtgtacctggaagactttcaccacgatgacgaggacgagggcttcctggaccgccacgtg
gccgacgagggcgccgatcccatggccgtgctacgcgaccagcgcctgcgcgcctcgctg
gtcgaggccatcaaggccctgcctgagcgcgagcagtacatcatgggcatgtactacgag
cacgacatgaacctgaaggaaatcgccgccgtcctgggcgtgaccgaatcgcgcgtgtgc
cagctgcacagccaggcgattgcgcggttgcggacgaagatgcgggggcactga
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